Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 PARP4P1-201ENST00000435945 2337 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 SKP1P1-201ENST00000438081 489 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC114755.4-201ENST00000439114 443 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 RAD23BP3-201ENST00000454157 1152 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 CHIAP1-201ENST00000456220 995 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 PMCHL2-203ENST00000457791 237 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC096922.1-201ENST00000461635 651 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 RN7SL685P-201ENST00000476271 298 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 RN7SL869P-201ENST00000497032 300 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC108120.1-201ENST00000506543 991 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 Y_RNA.701-201ENST00000516812 110 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 ARL2BPP5-201ENST00000523141 481 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 OR5AP1P-201ENST00000529730 940 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AP000619.1-201ENST00000540293 1000 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC092821.2-201ENST00000545710 2042 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC125611.2-201ENST00000551907 647 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AL390334.1-201ENST00000556395 450 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 MIR3689F-201ENST00000579617 66 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 MIR3682-201ENST00000581338 84 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC005614.1-201ENST00000598952 3653 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC073488.8-201ENST00000631952 757 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC007996.1-201ENST00000620414 2821 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 FARSBP1-201ENST00000435808 1778 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 NF1P8-201ENST00000415351 1461 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AC021242.1-201ENST00000507315 2035 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 Y_RNA.97-201ENST00000363094 102 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 RNU6-780P-201ENST00000391030 104 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AL034374.1-201ENST00000406329 351 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AL356776.1-201ENST00000406574 447 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AC004986.1-201ENST00000414855 607 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 ZNF90P2-204ENST00000419323 1075 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AL513174.1-201ENST00000423182 629 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AC073335.1-201ENST00000427776 363 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 RPL7P4-203ENST00000430239 730 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 MTND1P18-201ENST00000448191 573 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AC005550.2-201ENST00000476382 318 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 ACTR3P3-201ENST00000480448 893 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 RN7SL335P-201ENST00000482790 304 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms