Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC024940.4-201ENST00000605507 246 ntBASIC7.19□□□□□ -1.26
NPC1L1Q9UHC9 AC126915.2-201ENST00000610957 190 ntBASIC7.19□□□□□ -1.26
NPC1L1Q9UHC9 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
NPC1L1Q9UHC9 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC7.19□□□□□ -1.26
NPC1L1Q9UHC9 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NPC1L1Q9UHC9 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.19□□□□□ -1.26
NPC1L1Q9UHC9 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 RNU1-74P-201ENST00000384108 171 ntBASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 MIR589-201ENST00000385238 99 ntBASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 RN7SKP216-201ENST00000411050 312 ntBASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 AL136231.1-201ENST00000429407 730 ntBASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 FAR2P1-206ENST00000449736 709 ntBASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 AL389915.2-201ENST00000454576 441 ntBASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 RPS4XP1-201ENST00000482189 787 ntBASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 RPL7P41-201ENST00000485823 957 ntBASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 RPS4XP20-201ENST00000505751 772 ntBASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 AC027369.5-201ENST00000533838 755 ntBASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 MTCYBP13-201ENST00000578634 1093 ntBASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPC1L1Q9UHC9 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 SNORA17.1-201ENST00000362945 126 ntBASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 RN7SKP153-201ENST00000365026 316 ntBASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 MIR1182-201ENST00000408363 97 ntBASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 RN7SKP273-201ENST00000411392 314 ntBASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 AC005033.1-201ENST00000428904 813 ntBASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 CR383656.1-201ENST00000484916 377 ntBASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 AC105420.1-201ENST00000504389 582 ntBASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 AC021193.1-201ENST00000511607 420 ntBASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 AC009597.2-201ENST00000604659 592 ntBASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NPC1L1Q9UHC9 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 MRRFP1-201ENST00000435941 1675 ntBASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 MIR585-201ENST00000384887 94 ntBASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 RNA5SP241-201ENST00000391326 114 ntBASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 DUTP5-201ENST00000406790 469 ntBASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 RPL19P16-201ENST00000433839 588 ntBASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC7.16□□□□□ -1.26
NPC1L1Q9UHC9 AC005532.2-201ENST00000467154 373 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms