Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 BLZF2P-201ENST00000553776 1130 ntBASIC5.16□□□□□ -1.58
CCDC88CQ9P219 AC027216.1-201ENST00000577726 685 ntBASIC5.16□□□□□ -1.58
CCDC88CQ9P219 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 RPSAP73-201ENST00000614820 330 ntBASIC5.16□□□□□ -1.58
CCDC88CQ9P219 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 C4BPAP1-201ENST00000415474 1893 ntBASIC5.15□□□□□ -1.58
CCDC88CQ9P219 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
CCDC88CQ9P219 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC88CQ9P219 AP000473.2-201ENST00000602659 1537 ntBASIC5.15□□□□□ -1.58
CCDC88CQ9P219 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC88CQ9P219 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.15□□□□□ -1.58
CCDC88CQ9P219 AC013268.3-201ENST00000262716 2324 ntBASIC5.15□□□□□ -1.58
CCDC88CQ9P219 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC88CQ9P219 AC027279.1-201ENST00000568885 4284 ntBASIC5.15□□□□□ -1.58
CCDC88CQ9P219 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC88CQ9P219 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC88CQ9P219 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.15□□□□□ -1.58
CCDC88CQ9P219 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC88CQ9P219 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.15□□□□□ -1.58
CCDC88CQ9P219 Z80107.2-201ENST00000445127 392 ntBASIC5.15□□□□□ -1.58
CCDC88CQ9P219 OTX2P1-201ENST00000450956 354 ntBASIC5.15□□□□□ -1.58
CCDC88CQ9P219 AL389915.2-201ENST00000454576 441 ntBASIC5.15□□□□□ -1.58
CCDC88CQ9P219 RPS23P2-201ENST00000463671 415 ntBASIC5.15□□□□□ -1.58
CCDC88CQ9P219 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.15□□□□□ -1.58
CCDC88CQ9P219 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.15□□□□□ -1.58
CCDC88CQ9P219 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.15□□□□□ -1.58
CCDC88CQ9P219 RNA5SP373-201ENST00000517271 95 ntBASIC5.15□□□□□ -1.58
CCDC88CQ9P219 AC103968.1-201ENST00000557841 573 ntBASIC5.15□□□□□ -1.58
CCDC88CQ9P219 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.15□□□□□ -1.58
CCDC88CQ9P219 AC007204.2-201ENST00000615022 616 ntBASIC5.15□□□□□ -1.58
CCDC88CQ9P219 AC090510.2-201ENST00000617465 629 ntBASIC5.15□□□□□ -1.58
CCDC88CQ9P219 RNA5SP439-201ENST00000617595 124 ntBASIC5.15□□□□□ -1.58
CCDC88CQ9P219 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.15□□□□□ -1.58
CCDC88CQ9P219 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC88CQ9P219 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC88CQ9P219 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC88CQ9P219 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
CCDC88CQ9P219 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC88CQ9P219 RNU1-19P-201ENST00000363306 165 ntBASIC5.14□□□□□ -1.59
CCDC88CQ9P219 PPIAP9-201ENST00000403866 498 ntBASIC5.14□□□□□ -1.59
CCDC88CQ9P219 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.14□□□□□ -1.59
CCDC88CQ9P219 RNU4-34P-201ENST00000410431 124 ntBASIC5.14□□□□□ -1.59
CCDC88CQ9P219 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC88CQ9P219 FAM96AP1-201ENST00000430879 482 ntBASIC5.14□□□□□ -1.59
CCDC88CQ9P219 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC88CQ9P219 CBX1P5-201ENST00000475330 559 ntBASIC5.14□□□□□ -1.59
CCDC88CQ9P219 RN7SL184P-201ENST00000488308 297 ntBASIC5.14□□□□□ -1.59
CCDC88CQ9P219 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CCDC88CQ9P219 AC084824.2-201ENST00000548906 345 ntBASIC5.14□□□□□ -1.59
CCDC88CQ9P219 AC127381.1-201ENST00000555979 939 ntBASIC5.14□□□□□ -1.59
CCDC88CQ9P219 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC88CQ9P219 AC063952.1-203ENST00000634410 658 ntBASIC5.14□□□□□ -1.59
CCDC88CQ9P219 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC88CQ9P219 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CCDC88CQ9P219 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC88CQ9P219 ADAM5-202ENST00000399789 1942 ntBASIC5.14□□□□□ -1.59
CCDC88CQ9P219 AL390774.1-201ENST00000411924 246 ntBASIC5.14□□□□□ -1.59
CCDC88CQ9P219 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC88CQ9P219 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC88CQ9P219 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC88CQ9P219 AC073850.1-201ENST00000449243 255 ntBASIC5.14□□□□□ -1.59
CCDC88CQ9P219 AC092647.2-201ENST00000452998 253 ntBASIC5.14□□□□□ -1.59
CCDC88CQ9P219 AC005532.2-201ENST00000467154 373 ntBASIC5.14□□□□□ -1.59
CCDC88CQ9P219 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC88CQ9P219 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC88CQ9P219 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC88CQ9P219 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC88CQ9P219 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC88CQ9P219 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC88CQ9P219 AC008115.3-201ENST00000614874 549 ntBASIC5.14□□□□□ -1.59
CCDC88CQ9P219 AC037198.3-201ENST00000616754 526 ntBASIC5.14□□□□□ -1.59
CCDC88CQ9P219 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC88CQ9P219 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 LINC01963-201ENST00000562038 3148 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 U8.4-201ENST00000363626 134 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 AC009506.2-201ENST00000420635 840 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 RIMKLBP2-201ENST00000424737 654 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 TCEA1P3-201ENST00000443005 880 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 NDUFB5P1-201ENST00000508134 564 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 GTF2F2P1-201ENST00000511083 675 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 OR10G5P-201ENST00000532733 358 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms