Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 H3F3BP2-201ENST00000583907 357 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AL391262.2-201ENST00000622466 494 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AP001962.1-201ENST00000624114 559 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AL390318.1-201ENST00000624564 687 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 MIR193BHG-214ENST00000641765 509 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 CDY11P-201ENST00000447168 1651 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AC020633.1-201ENST00000468439 2247 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 OR51C1P-202ENST00000641159 1444 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 OR13C1P-202ENST00000641378 2919 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 RNU6-819P-201ENST00000364116 107 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 RN7SKP15-201ENST00000364742 309 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 RN7SKP292-201ENST00000365522 317 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 RMRPP5-201ENST00000411156 267 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 RPS6P14-201ENST00000425165 719 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 GAPDHP34-201ENST00000432112 823 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 Z85994.2-201ENST00000434327 452 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 OR6C72P-201ENST00000451403 892 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 LRRC37A14P-201ENST00000452297 462 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 CBX1P2-201ENST00000453841 458 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 MTND2P39-201ENST00000457230 764 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 AC087672.1-201ENST00000479876 766 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 RNU6-615P-201ENST00000516065 106 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 MTND1P36-201ENST00000522384 936 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 MRPS16P1-201ENST00000523462 412 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 NPM1P45-201ENST00000583151 559 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 AL356608.1-201ENST00000610034 820 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 AC008833.1-201ENST00000611633 691 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 AC106730.3-201ENST00000624568 641 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 MTCO1P7-201ENST00000419523 1542 ntBASIC5.73□□□□□ -1.49
PCDH9Q9HC56 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PCDH9Q9HC56 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 MRE11P1-201ENST00000464884 2127 ntBASIC5.72□□□□□ -1.49
PCDH9Q9HC56 AP001284.1-201ENST00000528393 2118 ntBASIC5.72□□□□□ -1.49
PCDH9Q9HC56 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.72□□□□□ -1.49
PCDH9Q9HC56 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 SNORD56.6-201ENST00000384569 71 ntBASIC5.72□□□□□ -1.49
PCDH9Q9HC56 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 AC093155.2-201ENST00000420734 937 ntBASIC5.72□□□□□ -1.49
PCDH9Q9HC56 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 MTND6P12-201ENST00000428247 522 ntBASIC5.72□□□□□ -1.49
PCDH9Q9HC56 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 RPS29P14-201ENST00000431518 171 ntBASIC5.72□□□□□ -1.49
PCDH9Q9HC56 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms