Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 IARS-205ENST00000443024 4341 ntTSL 5 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 RNU6-463P-201ENST00000384340 107 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 RNA5SP122-201ENST00000384457 108 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 MIR152-201ENST00000385212 87 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 TPMTP3-201ENST00000411928 735 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 RPLP1P10-201ENST00000413972 339 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 GTF2IP2-201ENST00000424290 697 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 Z98949.2-201ENST00000440996 144 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 CTSLP6-201ENST00000458273 1002 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AC007537.2-201ENST00000472093 511 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 RN7SL70P-201ENST00000478322 302 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AC109462.1-201ENST00000491087 368 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AC010342.1-201ENST00000514047 877 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AC009729.1-201ENST00000548873 1133 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 EEF1B2P1-201ENST00000567221 672 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AC008536.2-201ENST00000607284 349 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AL590410.1-201ENST00000617925 333 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AC073593.1-201ENST00000624500 411 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 AC011471.4-201ENST00000638271 216 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 FANCD2P2-201ENST00000437591 1400 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 UGT2B25P-201ENST00000511504 1586 ntBASIC8.25□□□□□ -1.09
TRIM47Q96LD4 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
TRIM47Q96LD4 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AP003471.1-202ENST00000319051 1988 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 EEF1A1P26-201ENST00000458319 1363 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AP002364.1-201ENST00000623330 3386 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 ARHGAP42P4-201ENST00000549782 2934 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AL391994.1-201ENST00000254724 282 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 MIR421-201ENST00000365696 85 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 IARS-201ENST00000375627 697 ntTSL 3 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 RNU6-348P-201ENST00000384386 107 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AC026310.1-201ENST00000396004 378 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 CCNG1P1-201ENST00000406783 885 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 RNA5SP155-201ENST00000411154 129 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AL035458.1-201ENST00000433096 585 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AL392003.1-201ENST00000434394 243 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AL512286.1-201ENST00000439244 400 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AL136455.1-201ENST00000441083 1240 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 IGKV1OR2-2-201ENST00000451163 355 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 MTND1P9-201ENST00000453775 944 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AP002345.1-201ENST00000456493 928 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AL096803.1-201ENST00000456921 1021 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 RN7SL492P-201ENST00000460700 295 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AC104339.1-201ENST00000465478 348 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 OR2A3P-201ENST00000493774 953 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AC008837.1-201ENST00000511513 412 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 RN7SKP298-201ENST00000515950 94 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 RN7SKP11-201ENST00000517018 287 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 SEPT10P1-201ENST00000517342 1162 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 NATP-201ENST00000523491 878 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms