Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 RPL7P6-201ENST00000480903 738 ntBASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 PGAM1P13-201ENST00000507497 754 ntBASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 HMGB1P40-201ENST00000525121 540 ntBASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 AC005341.1-201ENST00000571086 708 ntBASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 RBM22P1-201ENST00000578589 1214 ntBASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 RN7SL356P-201ENST00000582228 248 ntBASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 AC007938.2-201ENST00000604666 2634 ntBASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 MIR6826-201ENST00000617808 98 ntBASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 uc_338.7-201ENST00000621834 124 ntBASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ECHDC3Q96DC8 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 PPIAP9-201ENST00000403866 498 ntBASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 MIR1286-201ENST00000408112 78 ntBASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 RPL7L1P9-201ENST00000431298 745 ntBASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 AC138409.2-202ENST00000507274 458 ntBASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 SCARNA20.4-201ENST00000516969 131 ntBASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 SEPT10P1-201ENST00000517342 1162 ntBASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 AC020937.1-201ENST00000519677 1013 ntBASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 AC079064.1-201ENST00000528365 362 ntBASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 AP004607.2-201ENST00000533949 322 ntBASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 AC235565.1-201ENST00000456962 1325 ntBASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ECHDC3Q96DC8 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 AC116158.1-201ENST00000560231 2129 ntBASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 AL354868.1-201ENST00000417077 482 ntBASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 RANP7-201ENST00000418085 644 ntBASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 BX510359.3-201ENST00000422168 306 ntBASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 AC092754.1-201ENST00000472975 479 ntBASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 RPS21P4-201ENST00000487122 248 ntBASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 AC111000.6-201ENST00000514471 709 ntBASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 SNORA70.11-201ENST00000515987 138 ntBASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 SNORA70.13-201ENST00000516116 138 ntBASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 AL049779.2-201ENST00000553847 315 ntBASIC5.42□□□□□ -1.54
ECHDC3Q96DC8 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms