Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC044810.1-201ENST00000480271 711 ntBASIC5.02□□□□□ -1.61
RFT1Q96AA3 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 AL158068.1-201ENST00000506116 616 ntBASIC5.02□□□□□ -1.61
RFT1Q96AA3 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 SEPT10P1-201ENST00000517342 1162 ntBASIC5.02□□□□□ -1.61
RFT1Q96AA3 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 BTG1P1-201ENST00000540396 508 ntBASIC5.02□□□□□ -1.61
RFT1Q96AA3 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RFT1Q96AA3 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 SNORD39.2-201ENST00000579995 76 ntBASIC5.02□□□□□ -1.61
RFT1Q96AA3 MIR4701-201ENST00000583094 63 ntBASIC5.02□□□□□ -1.61
RFT1Q96AA3 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 AC005479.3-201ENST00000602790 431 ntBASIC5.02□□□□□ -1.61
RFT1Q96AA3 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 AL118508.4-201ENST00000624142 1176 ntBASIC5.02□□□□□ -1.61
RFT1Q96AA3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RFT1Q96AA3 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RFT1Q96AA3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFT1Q96AA3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RFT1Q96AA3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RFT1Q96AA3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFT1Q96AA3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFT1Q96AA3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFT1Q96AA3 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RFT1Q96AA3 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RFT1Q96AA3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFT1Q96AA3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 AL606537.1-201ENST00000607258 2011 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFT1Q96AA3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFT1Q96AA3 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFT1Q96AA3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFT1Q96AA3 RNU6-1320P-201ENST00000390838 107 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 SNORD65-201ENST00000391079 73 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 RNU6-1269P-201ENST00000391139 107 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFT1Q96AA3 GCNT1P4-201ENST00000404096 329 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 RNA5SP198-201ENST00000410376 127 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 AC099782.1-201ENST00000425889 474 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 AC006455.6-201ENST00000426192 893 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 MRPS33P4-201ENST00000434892 317 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 TRIM60P16-201ENST00000444048 694 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 KF459542.1-201ENST00000450908 553 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 AL513343.1-201ENST00000451818 792 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 AC002553.2-201ENST00000453217 340 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 MEMO1P4-201ENST00000453590 386 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 TPRKBP1-201ENST00000456243 481 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 RNU6-599P-201ENST00000459383 107 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 RNU6-1193P-201ENST00000459461 107 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 RN7SL254P-201ENST00000460609 284 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 RN7SL269P-201ENST00000467795 305 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 AL157777.1-201ENST00000468100 304 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 OR52A4P-202ENST00000481634 799 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RFT1Q96AA3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 RNU6-760P-201ENST00000516078 97 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RFT1Q96AA3 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 NMNAT1P5-201ENST00000559657 841 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 AC092868.3-201ENST00000560515 784 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 MTND2P13-201ENST00000577438 1039 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 AC005726.4-201ENST00000582858 458 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 AC068768.2-201ENST00000602352 343 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 AC015802.5-201ENST00000607478 399 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 AL139124.1-201ENST00000609123 421 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 AC004801.6-201ENST00000616571 978 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 BNIP3P41-202ENST00000616656 861 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 MIR6721-201ENST00000617181 87 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 RNU6-368P-201ENST00000620928 107 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 RNU6-538P-201ENST00000622329 107 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms