Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 OR13K1P-201ENST00000444577 975 ntBASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 CLMN-206ENST00000556441 452 ntTSL 5 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 RBM22P12-201ENST00000567098 1255 ntBASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AL021368.3-201ENST00000607119 578 ntBASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 MIR7703-201ENST00000620784 77 ntBASIC1.68□□□□□ -2.14
SYNE1Q8NF91 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AC140479.2-201ENST00000421567 3130 ntBASIC1.68□□□□□ -2.14
SYNE1Q8NF91 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AL360081.1-201ENST00000428299 555 ntBASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AL596266.1-201ENST00000448132 400 ntBASIC1.68□□□□□ -2.14
SYNE1Q8NF91 OR2AO1P-201ENST00000476497 403 ntBASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AP002373.2-201ENST00000541631 1060 ntBASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AC027334.1-201ENST00000603257 310 ntBASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 ING3-204ENST00000431467 1447 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AL356967.1-201ENST00000406305 431 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 SNORA11F-201ENST00000408237 128 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AL049872.1-201ENST00000556323 322 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 GNG5P2-201ENST00000372054 207 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 TMA16P2-201ENST00000413187 601 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 PRELID3BP5-201ENST00000508612 460 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 RNU6ATAC24P-201ENST00000516811 135 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC078899.1-201ENST00000521432 1185 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 DPPA3P2-202ENST00000557188 1219 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC100827.5-201ENST00000615883 426 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC068870.2-201ENST00000620635 389 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 MIR141-201ENST00000384975 95 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC016397.1-201ENST00000412463 242 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 RBMY2QP-201ENST00000429799 1147 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 RPSAP50-201ENST00000481955 852 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AP000676.2-201ENST00000529711 301 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms