Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 DNAJC19P1-201ENST00000455312 319 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 GAPDHP53-201ENST00000458397 924 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 RNA5SP269-201ENST00000459032 137 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 RPSAP37-201ENST00000470913 821 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AC013828.1-201ENST00000481845 158 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AC147055.4-201ENST00000504399 745 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 RN7SKP233-201ENST00000517005 110 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 SMARCE1P4-201ENST00000523647 241 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 PDCL3P1-201ENST00000534575 734 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 MIR4800-201ENST00000537353 80 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AL445383.1-201ENST00000554689 874 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AL109628.1-201ENST00000556877 366 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 SNORA70D-201ENST00000578836 135 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AC092960.1-201ENST00000604762 351 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 Y_RNA.812-201ENST00000610788 101 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 Y_RNA.784-201ENST00000613803 101 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 Y_RNA.787-201ENST00000616522 101 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 Y_RNA.780-201ENST00000617336 101 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 Y_RNA.801-201ENST00000619005 101 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AC002550.2-201ENST00000621246 394 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AC009033.1-201ENST00000624279 431 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
ATG4DQ86TL0 OR52B5P-204ENST00000641744 3467 ntBASIC6.34□□□□□ -1.4
ATG4DQ86TL0 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
ATG4DQ86TL0 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
ATG4DQ86TL0 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.4
ATG4DQ86TL0 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
ATG4DQ86TL0 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 RNU6-931P-201ENST00000363850 107 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 Y_RNA.450-201ENST00000384198 113 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 MIR640-201ENST00000385086 96 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AC003045.1-201ENST00000398779 713 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 RPL21P108-201ENST00000413857 481 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AC008850.1-201ENST00000427546 362 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 SUMO2P10-201ENST00000452006 288 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 ST13P21-201ENST00000453250 1098 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 RBMY2EP-202ENST00000456360 940 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 TREML3P-201ENST00000457327 501 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 RBM43P1-201ENST00000476891 1081 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AHI1-208ENST00000488690 712 ntTSL 5 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AL358832.1-201ENST00000497800 389 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AC093325.1-201ENST00000508378 326 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 RN7SKP298-201ENST00000515950 94 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 MIR4528-201ENST00000577763 90 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 MIR6774-201ENST00000614651 70 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AC002553.4-201ENST00000616896 331 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AC010338.1-201ENST00000621823 717 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.33□□□□□ -1.4
ATG4DQ86TL0 AC007938.1-201ENST00000562524 2902 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms