Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 HIRAP1-201ENST00000605318 787 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 NANOGP3-201ENST00000605855 286 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 AC027449.1-201ENST00000608890 407 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 AL512652.1-201ENST00000619006 500 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 FAM27E2-201ENST00000619668 403 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 FRG1DP-201ENST00000635586 771 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 AC009452.1-201ENST00000640823 606 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHFQ7M4L6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHFQ7M4L6 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHFQ7M4L6 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 AL034546.1-201ENST00000623740 3693 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHFQ7M4L6 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHFQ7M4L6 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHFQ7M4L6 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHFQ7M4L6 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.21□□□□□ -1.57
SHFQ7M4L6 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.57
SHFQ7M4L6 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
SHFQ7M4L6 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SHFQ7M4L6 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SHFQ7M4L6 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SHFQ7M4L6 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHFQ7M4L6 GVINP1-202ENST00000531871 7271 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC010132.2-201ENST00000295493 1043 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHFQ7M4L6 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHFQ7M4L6 RN7SKP145-201ENST00000363291 303 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 MIR122-201ENST00000385044 85 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 GSTA12P-201ENST00000402398 508 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 RN7SKP108-201ENST00000411367 328 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 RN7SKP279-201ENST00000411383 298 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 MTND4LP13-201ENST00000425022 298 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC011242.1-201ENST00000433596 1158 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AL645931.1-201ENST00000439737 410 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 RPL32P14-201ENST00000463196 378 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 HMGN1P17-201ENST00000513734 295 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 MAST4-IT1-201ENST00000514241 658 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 FTH1P11-201ENST00000517577 551 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 AP003355.1-201ENST00000518956 587 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHFQ7M4L6 MRPS21P8-201ENST00000569196 235 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 MTND1P8-201ENST00000571424 950 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC145423.1-201ENST00000605712 336 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC004477.3-201ENST00000614061 590 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC091046.2-201ENST00000620775 665 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC090617.9-201ENST00000623751 147 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC090506.2-201ENST00000624521 419 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 AC005618.4-201ENST00000625053 554 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 OR4G3P-201ENST00000633500 913 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms