Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SOX4Q06945 ROCK1P1-201ENST00000573767 549 ntBASIC7.08□□□□□ -1.28
SOX4Q06945 BNIP3P33-201ENST00000598912 569 ntBASIC7.08□□□□□ -1.28
SOX4Q06945 AC112230.1-201ENST00000604342 547 ntBASIC7.08□□□□□ -1.28
SOX4Q06945 AC005021.1-201ENST00000608730 355 ntBASIC7.08□□□□□ -1.28
SOX4Q06945 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
SOX4Q06945 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.08□□□□□ -1.28
SOX4Q06945 OR1N1-202ENST00000619659 939 ntBASIC7.08□□□□□ -1.28
SOX4Q06945 OR5AK4P-201ENST00000635912 903 ntBASIC7.08□□□□□ -1.28
SOX4Q06945 AC099654.12-201ENST00000639868 649 ntBASIC7.08□□□□□ -1.28
SOX4Q06945 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SOX4Q06945 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.08□□□□□ -1.28
SOX4Q06945 AC007998.4-201ENST00000612496 2533 ntBASIC7.08□□□□□ -1.28
SOX4Q06945 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC7.08□□□□□ -1.28
SOX4Q06945 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.08□□□□□ -1.28
SOX4Q06945 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SOX4Q06945 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
SOX4Q06945 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.08□□□□□ -1.28
SOX4Q06945 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.08□□□□□ -1.28
SOX4Q06945 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SOX4Q06945 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SOX4Q06945 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SOX4Q06945 AL137100.1-201ENST00000556703 1620 ntBASIC7.08□□□□□ -1.28
SOX4Q06945 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SOX4Q06945 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.08□□□□□ -1.28
SOX4Q06945 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SOX4Q06945 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SOX4Q06945 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.08□□□□□ -1.28
SOX4Q06945 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SOX4Q06945 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.08□□□□□ -1.28
SOX4Q06945 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SOX4Q06945 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
SOX4Q06945 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
SOX4Q06945 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.07□□□□□ -1.28
SOX4Q06945 AC007485.2-201ENST00000623493 1667 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SOX4Q06945 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.07□□□□□ -1.28
SOX4Q06945 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
SOX4Q06945 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
SOX4Q06945 AL391994.1-201ENST00000254724 282 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 OR4G2P-201ENST00000328113 903 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SOX4Q06945 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SOX4Q06945 RN7SKP33-201ENST00000410942 340 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC7.07□□□□□ -1.28
SOX4Q06945 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC7.07□□□□□ -1.28
SOX4Q06945 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SOX4Q06945 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.07□□□□□ -1.28
SOX4Q06945 AC104651.1-201ENST00000427559 735 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.07□□□□□ -1.28
SOX4Q06945 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC7.07□□□□□ -1.28
SOX4Q06945 AL592437.1-201ENST00000443781 492 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 USP9YP29-201ENST00000445112 563 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7.07□□□□□ -1.28
SOX4Q06945 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.07□□□□□ -1.28
SOX4Q06945 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC7.07□□□□□ -1.28
SOX4Q06945 AC104339.1-201ENST00000465478 348 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 RPL31P58-201ENST00000469001 379 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 OR4G11P-201ENST00000492842 939 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 AC096751.1-202ENST00000502691 1067 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC7.07□□□□□ -1.28
SOX4Q06945 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.07□□□□□ -1.28
SOX4Q06945 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SOX4Q06945 Vault.2-201ENST00000516519 98 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.07□□□□□ -1.28
SOX4Q06945 AC106038.2-201ENST00000520706 568 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 NPM1P6-201ENST00000521088 871 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.07□□□□□ -1.28
SOX4Q06945 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.07□□□□□ -1.28
SOX4Q06945 AP003392.2-201ENST00000527269 208 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 AC135983.3-201ENST00000528049 1226 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.07□□□□□ -1.28
SOX4Q06945 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.07□□□□□ -1.28
SOX4Q06945 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.07□□□□□ -1.28
SOX4Q06945 AC091805.2-201ENST00000603848 235 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 AL157899.1-201ENST00000604110 936 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC7.07□□□□□ -1.28
SOX4Q06945 NDUFA8P1-201ENST00000605525 367 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 AL391497.1-201ENST00000608671 547 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 AC128687.2-201ENST00000609657 566 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 AL121873.1-201ENST00000616013 524 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 AC092794.2-201ENST00000620933 563 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 AC010435.1-201ENST00000623353 1177 ntBASIC7.07□□□□□ -1.28
SOX4Q06945 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.07□□□□□ -1.28
SOX4Q06945 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
SOX4Q06945 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.07□□□□□ -1.28
SOX4Q06945 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SOX4Q06945 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SOX4Q06945 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SOX4Q06945 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SOX4Q06945 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SOX4Q06945 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
SOX4Q06945 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.07□□□□□ -1.28
SOX4Q06945 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SOX4Q06945 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SOX4Q06945 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.06□□□□□ -1.28
SOX4Q06945 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SOX4Q06945 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SOX4Q06945 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms