Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCNA1P78396 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
CCNA1P78396 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CCNA1P78396 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
CCNA1P78396 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCNA1P78396 RNA5SP251-201ENST00000410614 137 ntBASIC6.26□□□□□ -1.41
CCNA1P78396 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.26□□□□□ -1.41
CCNA1P78396 PSMD10P3-201ENST00000437000 448 ntBASIC6.26□□□□□ -1.41
CCNA1P78396 H2AFZP6-201ENST00000444403 394 ntBASIC6.26□□□□□ -1.41
CCNA1P78396 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCNA1P78396 AC015864.1-201ENST00000496512 544 ntBASIC6.26□□□□□ -1.41
CCNA1P78396 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCNA1P78396 AC013701.1-201ENST00000522657 465 ntBASIC6.26□□□□□ -1.41
CCNA1P78396 AP001804.1-201ENST00000526868 919 ntBASIC6.26□□□□□ -1.41
CCNA1P78396 OR1F2P-201ENST00000570470 933 ntBASIC6.26□□□□□ -1.41
CCNA1P78396 AC016839.1-201ENST00000578162 867 ntBASIC6.26□□□□□ -1.41
CCNA1P78396 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.26□□□□□ -1.41
CCNA1P78396 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.26□□□□□ -1.41
CCNA1P78396 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.26□□□□□ -1.41
CCNA1P78396 MIR6820-201ENST00000611508 62 ntBASIC6.26□□□□□ -1.41
CCNA1P78396 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.26□□□□□ -1.41
CCNA1P78396 CYP4F35P-202ENST00000636121 390 ntBASIC6.26□□□□□ -1.41
CCNA1P78396 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCNA1P78396 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCNA1P78396 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCNA1P78396 AC005725.1-201ENST00000577346 2607 ntBASIC6.26□□□□□ -1.41
CCNA1P78396 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.26□□□□□ -1.41
CCNA1P78396 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCNA1P78396 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.26□□□□□ -1.41
CCNA1P78396 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCNA1P78396 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCNA1P78396 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CCNA1P78396 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCNA1P78396 AC022164.1-201ENST00000568767 2673 ntBASIC6.25□□□□□ -1.41
CCNA1P78396 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.25□□□□□ -1.41
CCNA1P78396 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.25□□□□□ -1.41
CCNA1P78396 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CCNA1P78396 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCNA1P78396 SNORA16A-201ENST00000384342 137 ntBASIC6.25□□□□□ -1.41
CCNA1P78396 AL109941.1-201ENST00000401925 229 ntBASIC6.25□□□□□ -1.41
CCNA1P78396 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.25□□□□□ -1.41
CCNA1P78396 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.25□□□□□ -1.41
CCNA1P78396 DPPA2P2-201ENST00000418220 897 ntBASIC6.25□□□□□ -1.41
CCNA1P78396 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.25□□□□□ -1.41
CCNA1P78396 H3F3BP1-201ENST00000440551 403 ntBASIC6.25□□□□□ -1.41
CCNA1P78396 GAPDHP25-201ENST00000447061 1001 ntBASIC6.25□□□□□ -1.41
CCNA1P78396 UBE2V2P4-201ENST00000447495 259 ntBASIC6.25□□□□□ -1.41
CCNA1P78396 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.25□□□□□ -1.41
CCNA1P78396 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCNA1P78396 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.25□□□□□ -1.41
CCNA1P78396 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCNA1P78396 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.25□□□□□ -1.41
CCNA1P78396 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.25□□□□□ -1.41
CCNA1P78396 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.25□□□□□ -1.41
CCNA1P78396 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.25□□□□□ -1.41
CCNA1P78396 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCNA1P78396 AC092490.3-201ENST00000545370 572 ntBASIC6.25□□□□□ -1.41
CCNA1P78396 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.25□□□□□ -1.41
CCNA1P78396 AC100827.5-201ENST00000615883 426 ntBASIC6.25□□□□□ -1.41
CCNA1P78396 AC018628.1-201ENST00000624147 3819 ntBASIC6.25□□□□□ -1.41
CCNA1P78396 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCNA1P78396 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.25□□□□□ -1.41
CCNA1P78396 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CCNA1P78396 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CCNA1P78396 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCNA1P78396 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CCNA1P78396 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CCNA1P78396 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.24□□□□□ -1.41
CCNA1P78396 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCNA1P78396 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CCNA1P78396 CASC19-281ENST00000642118 1554 ntBASIC6.24□□□□□ -1.41
CCNA1P78396 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CCNA1P78396 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCNA1P78396 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCNA1P78396 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCNA1P78396 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.24□□□□□ -1.41
CCNA1P78396 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CCNA1P78396 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCNA1P78396 RPL23AP17-201ENST00000401064 499 ntBASIC6.24□□□□□ -1.41
CCNA1P78396 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.24□□□□□ -1.41
CCNA1P78396 CBX1P3-201ENST00000413296 527 ntBASIC6.24□□□□□ -1.41
CCNA1P78396 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.24□□□□□ -1.41
CCNA1P78396 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.24□□□□□ -1.41
CCNA1P78396 NIPA2P1-201ENST00000426223 976 ntBASIC6.24□□□□□ -1.41
CCNA1P78396 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.24□□□□□ -1.41
CCNA1P78396 AC073410.1-201ENST00000435125 589 ntBASIC6.24□□□□□ -1.41
CCNA1P78396 AC092647.3-201ENST00000443044 633 ntBASIC6.24□□□□□ -1.41
CCNA1P78396 HIGD1AP8-201ENST00000453927 274 ntBASIC6.24□□□□□ -1.41
CCNA1P78396 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.24□□□□□ -1.41
CCNA1P78396 SLC25A51P1-201ENST00000468432 871 ntBASIC6.24□□□□□ -1.41
CCNA1P78396 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.24□□□□□ -1.41
CCNA1P78396 AC112184.1-201ENST00000505179 312 ntBASIC6.24□□□□□ -1.41
CCNA1P78396 RPS4XP20-201ENST00000505751 772 ntBASIC6.24□□□□□ -1.41
CCNA1P78396 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CCNA1P78396 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.24□□□□□ -1.41
CCNA1P78396 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.24□□□□□ -1.41
CCNA1P78396 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCNA1P78396 AP000432.2-201ENST00000624164 2048 ntBASIC6.24□□□□□ -1.41
CCNA1P78396 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCNA1P78396 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms