Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 SUMO2P19-201ENST00000518920 295 ntBASIC8.42□□□□□ -1.06
CLIP1P30622 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC8.42□□□□□ -1.06
CLIP1P30622 AC100827.5-201ENST00000615883 426 ntBASIC8.42□□□□□ -1.06
CLIP1P30622 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC8.42□□□□□ -1.06
CLIP1P30622 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
CLIP1P30622 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
CLIP1P30622 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CLIP1P30622 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CLIP1P30622 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CLIP1P30622 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC8.42□□□□□ -1.06
CLIP1P30622 AC073342.2-201ENST00000595842 1800 ntBASIC8.41□□□□□ -1.06
CLIP1P30622 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CLIP1P30622 SNURFL-201ENST00000309296 343 ntBASIC8.41□□□□□ -1.06
CLIP1P30622 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC8.41□□□□□ -1.06
CLIP1P30622 TEX41-206ENST00000432608 661 ntTSL 3 BASIC8.41□□□□□ -1.06
CLIP1P30622 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC8.41□□□□□ -1.06
CLIP1P30622 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC8.41□□□□□ -1.06
CLIP1P30622 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC8.41□□□□□ -1.06
CLIP1P30622 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC8.41□□□□□ -1.06
CLIP1P30622 AC092647.2-201ENST00000452998 253 ntBASIC8.41□□□□□ -1.06
CLIP1P30622 DNAJB5P1-201ENST00000454004 806 ntBASIC8.41□□□□□ -1.06
CLIP1P30622 RN7SL814P-201ENST00000487715 300 ntBASIC8.41□□□□□ -1.06
CLIP1P30622 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC8.41□□□□□ -1.06
CLIP1P30622 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CLIP1P30622 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC8.41□□□□□ -1.06
CLIP1P30622 uc_338.7-201ENST00000621834 124 ntBASIC8.41□□□□□ -1.06
CLIP1P30622 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC8.41□□□□□ -1.06
CLIP1P30622 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CLIP1P30622 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CLIP1P30622 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC8.41□□□□□ -1.06
CLIP1P30622 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CLIP1P30622 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC8.41□□□□□ -1.06
CLIP1P30622 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CLIP1P30622 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC8.4□□□□□ -1.06
CLIP1P30622 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
CLIP1P30622 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
CLIP1P30622 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CLIP1P30622 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CLIP1P30622 RN7SKP104-201ENST00000362605 328 ntBASIC8.4□□□□□ -1.06
CLIP1P30622 ATP6V1G1P7-201ENST00000415853 349 ntBASIC8.4□□□□□ -1.06
CLIP1P30622 RPS4XP16-201ENST00000427198 791 ntBASIC8.4□□□□□ -1.06
CLIP1P30622 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC8.4□□□□□ -1.06
CLIP1P30622 RHOT1P3-201ENST00000436571 331 ntBASIC8.4□□□□□ -1.06
CLIP1P30622 PA2G4P6-201ENST00000438325 1197 ntBASIC8.4□□□□□ -1.06
CLIP1P30622 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC8.4□□□□□ -1.06
CLIP1P30622 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC8.4□□□□□ -1.06
CLIP1P30622 GTF2F2P1-201ENST00000511083 675 ntBASIC8.4□□□□□ -1.06
CLIP1P30622 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC8.4□□□□□ -1.06
CLIP1P30622 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC8.4□□□□□ -1.06
CLIP1P30622 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC8.4□□□□□ -1.06
CLIP1P30622 FAM25E-202ENST00000608562 189 ntBASIC8.4□□□□□ -1.06
CLIP1P30622 AL627230.1-201ENST00000613077 211 ntBASIC8.4□□□□□ -1.06
CLIP1P30622 AL591926.8-201ENST00000616876 211 ntBASIC8.4□□□□□ -1.06
CLIP1P30622 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC8.4□□□□□ -1.06
CLIP1P30622 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CLIP1P30622 CR1-203ENST00000367051 7469 ntTSL 5 BASIC8.4□□□□□ -1.06
CLIP1P30622 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CLIP1P30622 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC8.4□□□□□ -1.06
CLIP1P30622 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
CLIP1P30622 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
CLIP1P30622 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.07
CLIP1P30622 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
CLIP1P30622 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC8.4□□□□□ -1.07
CLIP1P30622 CASC19-281ENST00000642118 1554 ntBASIC8.39□□□□□ -1.07
CLIP1P30622 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
CLIP1P30622 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
CLIP1P30622 DNAJA1P4-201ENST00000406473 1166 ntBASIC8.39□□□□□ -1.07
CLIP1P30622 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
CLIP1P30622 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC8.39□□□□□ -1.07
CLIP1P30622 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC8.39□□□□□ -1.07
CLIP1P30622 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC8.39□□□□□ -1.07
CLIP1P30622 AC083982.1-201ENST00000485679 344 ntBASIC8.39□□□□□ -1.07
CLIP1P30622 EIF3KP3-201ENST00000514461 639 ntBASIC8.39□□□□□ -1.07
CLIP1P30622 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC8.39□□□□□ -1.07
CLIP1P30622 AC011447.4-201ENST00000587562 111 ntBASIC8.39□□□□□ -1.07
CLIP1P30622 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
CLIP1P30622 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
CLIP1P30622 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC8.39□□□□□ -1.07
CLIP1P30622 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CLIP1P30622 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CLIP1P30622 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CLIP1P30622 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
CLIP1P30622 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
CLIP1P30622 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
CLIP1P30622 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CLIP1P30622 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
CLIP1P30622 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
CLIP1P30622 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CLIP1P30622 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC8.39□□□□□ -1.07
CLIP1P30622 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
CLIP1P30622 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CLIP1P30622 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
CLIP1P30622 AL158827.1-201ENST00000416300 391 ntBASIC8.38□□□□□ -1.07
CLIP1P30622 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CLIP1P30622 PSAT1P4-201ENST00000466500 526 ntBASIC8.38□□□□□ -1.07
CLIP1P30622 AL138960.1-201ENST00000613838 513 ntBASIC8.38□□□□□ -1.07
CLIP1P30622 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
CLIP1P30622 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CLIP1P30622 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC8.38□□□□□ -1.07
CLIP1P30622 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms