Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM49D1C9J1S8 AL138820.1-201ENST00000617901 5305 ntBASIC5.33□□□□□ -1.56
TRIM49D1C9J1S8 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AC106872.5-201ENST00000508856 1416 ntBASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AC090220.1-201ENST00000593078 1699 ntBASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 RN7SKP28-201ENST00000364770 305 ntBASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AC046176.1-201ENST00000435260 1170 ntBASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AC019185.1-201ENST00000442718 389 ntBASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AC108161.1-201ENST00000461060 402 ntBASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AP002884.1-201ENST00000479691 655 ntBASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AC058823.1-201ENST00000485315 474 ntBASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AC006499.4-201ENST00000510947 694 ntBASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 TRIM77BP-201ENST00000524985 1119 ntBASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AC005363.1-201ENST00000530779 351 ntBASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 RBM22P12-201ENST00000567098 1255 ntBASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AP001496.3-201ENST00000580230 913 ntBASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AP001284.1-201ENST00000528393 2118 ntBASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 AC023421.1-201ENST00000590535 1785 ntBASIC5.32□□□□□ -1.56
TRIM49D1C9J1S8 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 AC125336.1-201ENST00000508893 2827 ntBASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 OR52B3P-201ENST00000314715 928 ntBASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 MIR589-201ENST00000385238 99 ntBASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 RN7SKP16-201ENST00000410180 299 ntBASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 SRSF1P1-201ENST00000424058 520 ntBASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 CDY8P-201ENST00000428380 1279 ntBASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 GSTM5P1-201ENST00000434751 660 ntBASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 UBE2V2P4-201ENST00000447495 259 ntBASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 CDY20P-201ENST00000447528 1279 ntBASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 LDHBP2-201ENST00000456969 1005 ntBASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 AC011476.1-201ENST00000466725 307 ntBASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 OR5D2P-201ENST00000524390 911 ntBASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 MIR6071-201ENST00000616741 78 ntBASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 AC129915.3-201ENST00000634128 948 ntBASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM49D1C9J1S8 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TRIM49D1C9J1S8 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM49D1C9J1S8 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM49D1C9J1S8 CASC19-248ENST00000641674 1356 ntBASIC5.3□□□□□ -1.56
TRIM49D1C9J1S8 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM49D1C9J1S8 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM49D1C9J1S8 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM49D1C9J1S8 THAP12P5-201ENST00000405864 2275 ntBASIC5.3□□□□□ -1.56
TRIM49D1C9J1S8 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
TRIM49D1C9J1S8 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM49D1C9J1S8 OR7E25P-201ENST00000344844 931 ntBASIC5.3□□□□□ -1.56
TRIM49D1C9J1S8 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms