Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 RN7SL459P-201ENST00000481078 302 ntBASIC6.76□□□□□ -1.33
SCN11AQ9UI33 GLUD1P3-202ENST00000508551 200 ntBASIC6.76□□□□□ -1.33
SCN11AQ9UI33 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 IMPA1P1-201ENST00000510718 842 ntBASIC6.76□□□□□ -1.33
SCN11AQ9UI33 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.76□□□□□ -1.33
SCN11AQ9UI33 RNA5SP43-201ENST00000516559 110 ntBASIC6.76□□□□□ -1.33
SCN11AQ9UI33 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 EIF3FP1-201ENST00000613970 806 ntBASIC6.76□□□□□ -1.33
SCN11AQ9UI33 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 EPS15P1-202ENST00000459691 2071 ntBASIC6.76□□□□□ -1.33
SCN11AQ9UI33 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 AC015799.1-201ENST00000622996 3122 ntBASIC6.76□□□□□ -1.33
SCN11AQ9UI33 AC068733.2-201ENST00000605434 1418 ntBASIC6.75□□□□□ -1.33
SCN11AQ9UI33 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 MED28P3-201ENST00000444288 531 ntBASIC6.75□□□□□ -1.33
SCN11AQ9UI33 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 AC008897.1-201ENST00000494006 347 ntBASIC6.75□□□□□ -1.33
SCN11AQ9UI33 RN7SKP67-201ENST00000515905 235 ntBASIC6.75□□□□□ -1.33
SCN11AQ9UI33 AC063949.1-201ENST00000552900 865 ntBASIC6.75□□□□□ -1.33
SCN11AQ9UI33 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 MIR3934-201ENST00000579806 107 ntBASIC6.75□□□□□ -1.33
SCN11AQ9UI33 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.75□□□□□ -1.33
SCN11AQ9UI33 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.75□□□□□ -1.33
SCN11AQ9UI33 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 AL449283.1-201ENST00000602631 3403 ntBASIC6.75□□□□□ -1.33
SCN11AQ9UI33 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCN11AQ9UI33 RN7SKP145-201ENST00000363291 303 ntBASIC6.74□□□□□ -1.33
SCN11AQ9UI33 SNORA51.8-201ENST00000384234 132 ntBASIC6.74□□□□□ -1.33
SCN11AQ9UI33 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 CYB5AP4-201ENST00000396692 399 ntBASIC6.74□□□□□ -1.33
SCN11AQ9UI33 MTND4LP17-201ENST00000414607 293 ntBASIC6.74□□□□□ -1.33
SCN11AQ9UI33 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 AL772161.1-201ENST00000439130 476 ntBASIC6.74□□□□□ -1.33
SCN11AQ9UI33 AC005412.2-201ENST00000492004 341 ntBASIC6.74□□□□□ -1.33
SCN11AQ9UI33 CEACAMP10-202ENST00000495431 496 ntBASIC6.74□□□□□ -1.33
SCN11AQ9UI33 AC097173.1-201ENST00000505862 819 ntBASIC6.74□□□□□ -1.33
SCN11AQ9UI33 BTF3P13-201ENST00000513224 490 ntBASIC6.74□□□□□ -1.33
SCN11AQ9UI33 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 OR7E128P-201ENST00000532736 1024 ntBASIC6.74□□□□□ -1.33
SCN11AQ9UI33 AC079075.1-201ENST00000559543 878 ntBASIC6.74□□□□□ -1.33
SCN11AQ9UI33 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 MIR6133-201ENST00000617057 108 ntBASIC6.74□□□□□ -1.33
SCN11AQ9UI33 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 AC104964.3-201ENST00000606115 2860 ntBASIC6.74□□□□□ -1.33
SCN11AQ9UI33 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 AP004289.1-201ENST00000436307 2205 ntBASIC6.74□□□□□ -1.33
SCN11AQ9UI33 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 MAPK10-270ENST00000641102 3538 ntBASIC6.74□□□□□ -1.33
SCN11AQ9UI33 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 OR7E125P-201ENST00000443450 846 ntBASIC6.74□□□□□ -1.33
SCN11AQ9UI33 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 HMGN1P9-201ENST00000515212 298 ntBASIC6.74□□□□□ -1.33
SCN11AQ9UI33 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms