Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 Z93019.1-201ENST00000416450 973 ntBASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 RN7SL583P-201ENST00000475692 287 ntBASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 AC105420.1-201ENST00000504389 582 ntBASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 RN7SKP99-201ENST00000517028 307 ntBASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 AC007448.1-201ENST00000582714 234 ntBASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 AL139041.1-201ENST00000605480 610 ntBASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 AC007786.3-201ENST00000615154 596 ntBASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 AC097063.1-201ENST00000426714 1797 ntBASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 AC116158.1-201ENST00000560231 2129 ntBASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 AC068870.1-201ENST00000563737 2455 ntBASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 AP001029.2-203ENST00000589795 4910 ntBASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
CLIP2Q9UDT6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.52□□□□□ -1.36
CLIP2Q9UDT6 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.36
CLIP2Q9UDT6 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 RNA5SP326-201ENST00000363209 110 ntBASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 MIR551A-201ENST00000385042 96 ntBASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 RN7SKP278-201ENST00000410504 342 ntBASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 BMS1P13-201ENST00000417301 885 ntBASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 BX119904.3-201ENST00000428194 957 ntBASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 CYCSP12-201ENST00000437729 300 ntBASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 AL596266.1-201ENST00000448132 400 ntBASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 AL606490.1-201ENST00000452266 765 ntBASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 AC137627.1-201ENST00000545761 289 ntBASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 IMMP1LP3-201ENST00000604197 224 ntBASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 SUMO2P15-201ENST00000604285 278 ntBASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 AC136428.4-201ENST00000634254 1155 ntBASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 LINC01963-201ENST00000562038 3148 ntBASIC6.52□□□□□ -1.37
CLIP2Q9UDT6 AC235565.1-201ENST00000456962 1325 ntBASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 AC068870.3-201ENST00000625077 2536 ntBASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 MTCO1P7-201ENST00000419523 1542 ntBASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 OR9K1P-201ENST00000326513 941 ntBASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 RNU1-136P-201ENST00000384181 164 ntBASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 RNU1-77P-201ENST00000390868 162 ntBASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 RNGTTP1-201ENST00000420965 728 ntBASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 OR2AO1P-201ENST00000476497 403 ntBASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 RPSAP51-201ENST00000497462 645 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms