Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 RNA5SP110-201ENST00000362638 115 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 RN7SKP77-201ENST00000363261 353 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 MIR7-1-201ENST00000384871 110 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 MIR513B-201ENST00000385136 84 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 OR2W4P-201ENST00000406496 926 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 SNORA77.2-201ENST00000408571 112 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 ATP5LP2-201ENST00000440646 311 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AL136455.1-201ENST00000441083 1240 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 RPS10P18-201ENST00000442662 495 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 FTLP8-201ENST00000446770 267 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 RPL23AP60-201ENST00000450011 454 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AC002075.1-201ENST00000457396 676 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 NAP1L1P3-201ENST00000462291 880 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 RN7SL165P-201ENST00000477476 291 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AC114728.1-201ENST00000488289 483 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 RPL23AP73-201ENST00000492507 471 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 OR56A7P-201ENST00000524865 941 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 MTCYBP23-201ENST00000558717 1102 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AC068768.2-201ENST00000602352 343 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AL138895.2-201ENST00000603019 178 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 KATNBL1P5-201ENST00000605015 517 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AC024884.1-201ENST00000620583 399 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AC026124.2-201ENST00000621847 656 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AC004836.1-201ENST00000623032 634 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AC073488.3-201ENST00000631611 778 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AC139713.2-210ENST00000641741 992 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 HDAC1P2-201ENST00000453661 1398 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 SHQ1P1-201ENST00000437111 1544 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 RNU4-39P-201ENST00000362455 127 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 RNU105B-201ENST00000364478 208 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 RNU4-24P-201ENST00000364565 139 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 LCN1P2-201ENST00000372030 223 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 UBE2V1P11-201ENST00000411559 285 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AC096533.1-201ENST00000411645 353 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 MTATP6P20-201ENST00000414147 562 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 RPL30P16-201ENST00000419341 429 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 SEPT2P1-201ENST00000419651 180 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 MARK2P12-201ENST00000420129 585 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 TPTE2P6-202ENST00000445572 1007 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 OR6C72P-201ENST00000451403 892 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AL356390.1-201ENST00000455684 397 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AC083795.1-201ENST00000491760 320 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 ATG10-AS1-201ENST00000504846 648 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AC108475.1-201ENST00000507880 950 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AC117532.1-201ENST00000514638 323 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 SNORA81.2-201ENST00000516868 170 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 MTCYBP20-201ENST00000524239 1129 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 497 ms