Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AC092332.1-201ENST00000563684 829 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AC011500.1-201ENST00000601963 469 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 QTRT1P1-201ENST00000604344 1078 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AC087683.2-201ENST00000611384 326 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AL139099.4-201ENST00000614802 114 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 MIR6813-201ENST00000621638 56 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AC136428.4-201ENST00000634254 1155 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 FRG1DP-201ENST00000635586 771 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AC109446.4-201ENST00000623235 2755 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 CDY11P-201ENST00000447168 1651 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AL161912.4-201ENST00000623889 2468 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 RNU1-136P-201ENST00000384181 164 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 GTF2IP5-201ENST00000414608 731 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC138761.5-201ENST00000433967 325 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC007383.1-201ENST00000445875 636 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC073476.1-201ENST00000452854 407 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 GEMIN2P1-201ENST00000454246 752 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC104849.1-201ENST00000462623 405 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC098818.1-201ENST00000478593 252 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 SETP6-201ENST00000479329 568 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 RN7SL568P-201ENST00000493069 298 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 DUTP1-201ENST00000493631 470 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 OR7E157P-201ENST00000494376 911 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC093815.1-201ENST00000508637 280 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC111000.6-201ENST00000514471 709 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 RNU6-1334P-201ENST00000516032 105 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 RN7SKP265-201ENST00000516448 223 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 OR4A41P-201ENST00000533053 928 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 RN7SL230P-201ENST00000580835 303 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 EIF1P5-201ENST00000585002 234 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 BNIP3P32-201ENST00000600015 554 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC124916.2-201ENST00000604416 224 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC012213.4-201ENST00000606457 354 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 RNU6-1192P-201ENST00000612197 107 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 RNU6-489P-201ENST00000618289 107 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC093875.1-201ENST00000623688 504 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AL078595.3-201ENST00000623815 1166 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC068057.2-201ENST00000624047 895 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC126544.2-201ENST00000625174 749 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AP002833.3-201ENST00000625075 2265 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 OFD1P17-201ENST00000437639 3018 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC004656.1-201ENST00000568479 4951 ntBASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms