Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AL133388.1-201ENST00000404509 287 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 RPL7P56-201ENST00000429441 717 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AC105399.1-202ENST00000447303 205 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AC092754.1-201ENST00000472975 479 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 BX284632.1-201ENST00000478218 541 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 CEACAMP10-202ENST00000495431 496 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 HMGB1P44-201ENST00000508597 572 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 RN7SKP99-201ENST00000517028 307 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AC233699.1-201ENST00000569955 1168 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 MIR193BHG-214ENST00000641765 509 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 CCAT2-201ENST00000630920 1752 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AL034549.2-201ENST00000618285 3373 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AC023421.1-201ENST00000590535 1785 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 RPS21P8-201ENST00000413365 247 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 DSTNP5-201ENST00000427921 523 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 PA2G4P6-201ENST00000438325 1197 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AC073465.2-201ENST00000440938 498 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 RPSAP51-201ENST00000497462 645 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AC111000.6-201ENST00000514471 709 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AC020937.1-201ENST00000519677 1013 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AC009237.13-201ENST00000603193 276 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AC009704.2-201ENST00000618739 483 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 OFD1P17-201ENST00000437639 3018 ntBASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM3Q8TF72 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 AC089998.1-201ENST00000548575 3141 ntBASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 AL596266.1-201ENST00000448132 400 ntBASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 AC091912.1-201ENST00000511351 248 ntBASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 AC245389.2-201ENST00000616023 576 ntBASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 AC242843.1-201ENST00000618702 573 ntBASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 MIR8080-201ENST00000622224 89 ntBASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 AC140134.1-201ENST00000511830 3544 ntBASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 AC104581.5-201ENST00000624171 7141 ntBASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 AC010401.2-201ENST00000575137 4934 ntBASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 MAPK10-338ENST00000641647 3362 ntBASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 AL807761.1-201ENST00000417622 171 ntBASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 REG1CP-206ENST00000447469 496 ntBASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 RN7SL738P-201ENST00000470264 297 ntBASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 RN7SL814P-201ENST00000487715 300 ntBASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.55□□□□□ -1.52
SHROOM3Q8TF72 MIR378J-201ENST00000611988 109 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms