Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 ISCA1P2-201ENST00000438679 421 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 EEF1B2P3-201ENST00000447718 678 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 OSTCP1-201ENST00000455507 450 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC022415.1-202ENST00000486612 523 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 RPL5P14-201ENST00000494197 878 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC022206.1-201ENST00000495947 347 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC083906.1-201ENST00000509298 406 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 UGT2A3P7-201ENST00000510485 734 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 OR5H4P-201ENST00000510851 923 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 FABP5P12-201ENST00000515543 389 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 SNORA31.13-201ENST00000516624 135 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 IGLV3-6-201ENST00000523937 250 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 CYCSP25-201ENST00000525280 316 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC090826.1-203ENST00000569235 490 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AL031601.1-201ENST00000605702 394 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC097641.3-201ENST00000613523 464 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 uc_338.29-201ENST00000615099 168 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC007786.3-201ENST00000615154 596 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AL162574.1-201ENST00000615702 950 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 MRPL57P1-201ENST00000621486 265 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC010325.3-201ENST00000641084 394 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 CLCA3P-203ENST00000490028 2781 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC007998.4-201ENST00000612496 2533 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC007342.7-201ENST00000624610 2337 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 PPBPP2-201ENST00000513150 1362 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 ZNF542P-204ENST00000482727 1305 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 RNU4-75P-201ENST00000364621 146 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 SNORD65C-201ENST00000390962 71 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC010385.1-201ENST00000412374 256 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AL593851.1-201ENST00000426171 157 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 MTCYBP42-201ENST00000444653 1130 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 TIMM8BP2-201ENST00000445940 251 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 COX4I1P2-201ENST00000447446 547 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC233982.1-201ENST00000451247 436 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 OR2AF1P-201ENST00000454899 889 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 H3F3AP3-201ENST00000497682 407 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC107401.1-201ENST00000503426 685 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 OR51A1P-201ENST00000511110 946 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 TMEM97P2-201ENST00000517841 403 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 RPL12P22-201ENST00000519073 490 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC013701.1-201ENST00000522657 465 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 DEFB130C-202ENST00000530001 230 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms