Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VPS13CQ709C8 AC079298.1-201ENST00000625026 1619 ntBASIC4.19□□□□□ -1.74
VPS13CQ709C8 RPS3AP23-201ENST00000401762 784 ntBASIC4.19□□□□□ -1.74
VPS13CQ709C8 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS13CQ709C8 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS13CQ709C8 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS13CQ709C8 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS13CQ709C8 OR4A43P-201ENST00000532938 908 ntBASIC4.19□□□□□ -1.74
VPS13CQ709C8 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS13CQ709C8 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS13CQ709C8 AP005119.2-201ENST00000579735 1105 ntBASIC4.19□□□□□ -1.74
VPS13CQ709C8 AC105254.2-201ENST00000603636 436 ntBASIC4.19□□□□□ -1.74
VPS13CQ709C8 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.19□□□□□ -1.74
VPS13CQ709C8 AC087821.1-201ENST00000623639 567 ntBASIC4.19□□□□□ -1.74
VPS13CQ709C8 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS13CQ709C8 AC006210.2-201ENST00000367074 1545 ntBASIC4.19□□□□□ -1.74
VPS13CQ709C8 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS13CQ709C8 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS13CQ709C8 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS13CQ709C8 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS13CQ709C8 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS13CQ709C8 AL121977.1-201ENST00000401636 979 ntBASIC4.19□□□□□ -1.74
VPS13CQ709C8 AL139039.2-201ENST00000407436 479 ntBASIC4.19□□□□□ -1.74
VPS13CQ709C8 AL592293.2-201ENST00000422292 996 ntBASIC4.19□□□□□ -1.74
VPS13CQ709C8 FHP1-201ENST00000442741 703 ntBASIC4.19□□□□□ -1.74
VPS13CQ709C8 CR383656.1-201ENST00000484916 377 ntBASIC4.19□□□□□ -1.74
VPS13CQ709C8 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS13CQ709C8 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS13CQ709C8 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS13CQ709C8 AC068446.1-201ENST00000556425 1549 ntBASIC4.19□□□□□ -1.74
VPS13CQ709C8 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
VPS13CQ709C8 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS13CQ709C8 AC009962.1-201ENST00000567327 3813 ntBASIC4.19□□□□□ -1.74
VPS13CQ709C8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS13CQ709C8 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS13CQ709C8 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS13CQ709C8 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS13CQ709C8 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS13CQ709C8 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
VPS13CQ709C8 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS13CQ709C8 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS13CQ709C8 SNORA2.3-201ENST00000383920 135 ntBASIC4.18□□□□□ -1.74
VPS13CQ709C8 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.18□□□□□ -1.74
VPS13CQ709C8 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 RN7SKP106-201ENST00000410832 272 ntBASIC4.18□□□□□ -1.74
VPS13CQ709C8 AL158073.1-201ENST00000426848 1104 ntBASIC4.18□□□□□ -1.74
VPS13CQ709C8 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 AC079414.3-201ENST00000612986 1090 ntBASIC4.18□□□□□ -1.74
VPS13CQ709C8 RSL1D1-204ENST00000571133 5483 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS13CQ709C8 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 ASNSP1-204ENST00000641977 1664 ntBASIC4.18□□□□□ -1.74
VPS13CQ709C8 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.18□□□□□ -1.74
VPS13CQ709C8 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS13CQ709C8 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS13CQ709C8 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS13CQ709C8 AC023818.1-201ENST00000498379 384 ntBASIC4.18□□□□□ -1.74
VPS13CQ709C8 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS13CQ709C8 AC009643.1-201ENST00000532030 391 ntBASIC4.18□□□□□ -1.74
VPS13CQ709C8 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 AC019322.1-201ENST00000571869 389 ntBASIC4.18□□□□□ -1.74
VPS13CQ709C8 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.18□□□□□ -1.74
VPS13CQ709C8 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.18□□□□□ -1.74
VPS13CQ709C8 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 ST8SIA3-201ENST00000324000 11833 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS13CQ709C8 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS13CQ709C8 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS13CQ709C8 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS13CQ709C8 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS13CQ709C8 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 PRKG1-204ENST00000373985 6487 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS13CQ709C8 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS13CQ709C8 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 RPS4XP16-201ENST00000427198 791 ntBASIC4.18□□□□□ -1.74
VPS13CQ709C8 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 AC020779.1-201ENST00000478757 796 ntBASIC4.18□□□□□ -1.74
VPS13CQ709C8 AC010350.1-201ENST00000504908 231 ntBASIC4.18□□□□□ -1.74
VPS13CQ709C8 AC006427.1-201ENST00000514359 712 ntBASIC4.18□□□□□ -1.74
VPS13CQ709C8 OR7E128P-201ENST00000532736 1024 ntBASIC4.18□□□□□ -1.74
VPS13CQ709C8 AC084824.1-201ENST00000550917 1005 ntBASIC4.18□□□□□ -1.74
VPS13CQ709C8 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS13CQ709C8 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS13CQ709C8 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms