Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFWD3Q6PCD5 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RFWD3Q6PCD5 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFWD3Q6PCD5 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RFWD3Q6PCD5 CIR1P2-201ENST00000514821 1342 ntBASIC5.72□□□□□ -1.49
RFWD3Q6PCD5 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
RFWD3Q6PCD5 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.49
RFWD3Q6PCD5 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
RFWD3Q6PCD5 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RFWD3Q6PCD5 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RFWD3Q6PCD5 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.49
RFWD3Q6PCD5 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RFWD3Q6PCD5 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 MIR551A-201ENST00000385042 96 ntBASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 RNU1-77P-201ENST00000390868 162 ntBASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 Z93019.1-201ENST00000416450 973 ntBASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 AC007161.1-204ENST00000423039 460 ntBASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 HMGN2P27-201ENST00000427352 270 ntBASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 AC092106.1-201ENST00000444291 373 ntBASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 AC110749.1-201ENST00000462007 357 ntBASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 AC074386.1-201ENST00000476560 767 ntBASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 EIF1P7-201ENST00000487533 337 ntBASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 GOLGA5P1-201ENST00000507317 980 ntBASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 AC007066.2-202ENST00000566531 914 ntBASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 AP005403.1-201ENST00000579720 229 ntBASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 Z83820.1-201ENST00000456978 1499 ntBASIC5.71□□□□□ -1.5
RFWD3Q6PCD5 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 HSPD1P7-201ENST00000447985 1686 ntBASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 GPS2P1-201ENST00000411761 986 ntBASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 CYCSP12-201ENST00000437729 300 ntBASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 SPRYD7P1-201ENST00000443861 570 ntBASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 RN7SL177P-201ENST00000476596 299 ntBASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 SUMO2P4-201ENST00000504193 276 ntBASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 AC026782.2-201ENST00000510845 636 ntBASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 BX510359.5-201ENST00000515651 304 ntBASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 AC078878.1-201ENST00000539832 958 ntBASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 MIR4660-201ENST00000583549 74 ntBASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 AC010503.3-201ENST00000594355 540 ntBASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 FKBP1AP1-201ENST00000594588 318 ntBASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 AC000068.2-201ENST00000608816 460 ntBASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 RARSP1-201ENST00000542842 1418 ntBASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms