Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.3□□□□□ -1.56
PKNOX1P55347 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PKNOX1P55347 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.3□□□□□ -1.56
PKNOX1P55347 AL050305.1-201ENST00000399993 1230 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 GNG5P5-201ENST00000420444 220 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.3□□□□□ -1.56
PKNOX1P55347 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.3□□□□□ -1.56
PKNOX1P55347 RPL12P17-201ENST00000432393 498 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 RPL19P16-201ENST00000433839 588 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.3□□□□□ -1.56
PKNOX1P55347 OR6D1P-201ENST00000436165 939 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 VDAC2P4-201ENST00000452925 711 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 AP000547.1-201ENST00000454360 617 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 YRDCP3-201ENST00000456507 480 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.3□□□□□ -1.56
PKNOX1P55347 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.3□□□□□ -1.56
PKNOX1P55347 EIF4E2P2-201ENST00000492033 736 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 HMGN1P9-201ENST00000515212 298 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.3□□□□□ -1.56
PKNOX1P55347 AC079600.1-201ENST00000550326 297 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.3□□□□□ -1.56
PKNOX1P55347 OR11H3P-201ENST00000554547 982 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 AC009852.2-201ENST00000567898 485 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 OR51C1P-201ENST00000608504 942 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 AC244100.4-201ENST00000617747 388 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 AC091932.2-201ENST00000623014 291 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 AC135068.5-201ENST00000624197 983 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.3□□□□□ -1.56
PKNOX1P55347 AC008691.1-209ENST00000642094 814 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.3□□□□□ -1.56
PKNOX1P55347 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
PKNOX1P55347 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PKNOX1P55347 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PKNOX1P55347 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PKNOX1P55347 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PKNOX1P55347 AC106872.5-201ENST00000508856 1416 ntBASIC5.3□□□□□ -1.56
PKNOX1P55347 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PKNOX1P55347 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.29□□□□□ -1.56
PKNOX1P55347 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.29□□□□□ -1.56
PKNOX1P55347 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PKNOX1P55347 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.29□□□□□ -1.56
PKNOX1P55347 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
PKNOX1P55347 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PKNOX1P55347 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.29□□□□□ -1.56
PKNOX1P55347 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.29□□□□□ -1.56
PKNOX1P55347 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PKNOX1P55347 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.29□□□□□ -1.56
PKNOX1P55347 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.29□□□□□ -1.56
PKNOX1P55347 OR9K1P-201ENST00000326513 941 ntBASIC5.29□□□□□ -1.56
PKNOX1P55347 OR7E25P-201ENST00000344844 931 ntBASIC5.29□□□□□ -1.56
PKNOX1P55347 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PKNOX1P55347 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PKNOX1P55347 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PKNOX1P55347 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.29□□□□□ -1.56
PKNOX1P55347 FTLP19-201ENST00000433300 394 ntBASIC5.29□□□□□ -1.56
PKNOX1P55347 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.29□□□□□ -1.56
PKNOX1P55347 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.29□□□□□ -1.56
PKNOX1P55347 RPL12P24-201ENST00000474907 486 ntBASIC5.29□□□□□ -1.56
PKNOX1P55347 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PKNOX1P55347 MYL12BP2-201ENST00000503948 512 ntBASIC5.29□□□□□ -1.56
PKNOX1P55347 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.29□□□□□ -1.56
PKNOX1P55347 AC109464.1-201ENST00000511091 819 ntBASIC5.29□□□□□ -1.56
PKNOX1P55347 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.29□□□□□ -1.56
PKNOX1P55347 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.29□□□□□ -1.56
PKNOX1P55347 EIF4EP5-201ENST00000528228 640 ntBASIC5.29□□□□□ -1.56
PKNOX1P55347 LSM3P2-201ENST00000551246 273 ntBASIC5.29□□□□□ -1.56
PKNOX1P55347 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.29□□□□□ -1.56
PKNOX1P55347 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.29□□□□□ -1.56
PKNOX1P55347 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.29□□□□□ -1.56
PKNOX1P55347 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.29□□□□□ -1.56
PKNOX1P55347 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.29□□□□□ -1.56
PKNOX1P55347 AP005403.1-201ENST00000579720 229 ntBASIC5.29□□□□□ -1.56
PKNOX1P55347 PRPF19P1-201ENST00000584766 898 ntBASIC5.29□□□□□ -1.56
PKNOX1P55347 AC067773.1-201ENST00000603284 1094 ntBASIC5.29□□□□□ -1.56
PKNOX1P55347 AC006363.1-201ENST00000603806 463 ntBASIC5.29□□□□□ -1.56
PKNOX1P55347 AC009779.8-202ENST00000607990 932 ntBASIC5.29□□□□□ -1.56
PKNOX1P55347 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.29□□□□□ -1.56
PKNOX1P55347 AC244107.2-201ENST00000611773 76 ntBASIC5.29□□□□□ -1.56
PKNOX1P55347 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.29□□□□□ -1.56
PKNOX1P55347 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PKNOX1P55347 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.29□□□□□ -1.56
PKNOX1P55347 AC129915.3-201ENST00000634128 948 ntBASIC5.29□□□□□ -1.56
PKNOX1P55347 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PKNOX1P55347 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PKNOX1P55347 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PKNOX1P55347 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PKNOX1P55347 TCP11X1-202ENST00000622971 1372 ntBASIC5.29□□□□□ -1.56
PKNOX1P55347 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PKNOX1P55347 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.29□□□□□ -1.56
PKNOX1P55347 THAP12P5-201ENST00000405864 2275 ntBASIC5.28□□□□□ -1.56
PKNOX1P55347 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
PKNOX1P55347 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PKNOX1P55347 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PKNOX1P55347 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PKNOX1P55347 OR52B3P-201ENST00000314715 928 ntBASIC5.28□□□□□ -1.56
PKNOX1P55347 RNU1-19P-201ENST00000363306 165 ntBASIC5.28□□□□□ -1.56
PKNOX1P55347 AC007618.1-201ENST00000366455 732 ntBASIC5.28□□□□□ -1.56
PKNOX1P55347 OR1L6-202ENST00000373684 1044 ntBASIC5.28□□□□□ -1.56
PKNOX1P55347 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PKNOX1P55347 RPL12P9-201ENST00000412942 488 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms