Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH11P55287 AC023141.8-201ENST00000442554 208 ntBASIC5.22□□□□□ -1.57
CDH11P55287 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH11P55287 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH11P55287 ABCC13-202ENST00000463099 3842 ntBASIC5.22□□□□□ -1.57
CDH11P55287 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH11P55287 RN7SL193P-201ENST00000491708 276 ntBASIC5.22□□□□□ -1.57
CDH11P55287 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH11P55287 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH11P55287 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH11P55287 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH11P55287 AC022826.1-201ENST00000519383 805 ntBASIC5.22□□□□□ -1.57
CDH11P55287 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CDH11P55287 OR4A43P-201ENST00000532938 908 ntBASIC5.22□□□□□ -1.57
CDH11P55287 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH11P55287 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH11P55287 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH11P55287 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH11P55287 AC012146.2-201ENST00000576545 416 ntBASIC5.22□□□□□ -1.57
CDH11P55287 MIR4776-2-201ENST00000580204 80 ntBASIC5.22□□□□□ -1.57
CDH11P55287 AC005244.1-201ENST00000582566 339 ntBASIC5.22□□□□□ -1.57
CDH11P55287 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH11P55287 AC007423.1-201ENST00000605009 627 ntBASIC5.22□□□□□ -1.57
CDH11P55287 AC073111.2-201ENST00000605657 1075 ntBASIC5.22□□□□□ -1.57
CDH11P55287 MIR6133-201ENST00000617057 108 ntBASIC5.22□□□□□ -1.57
CDH11P55287 AC020978.9-201ENST00000624380 1141 ntBASIC5.22□□□□□ -1.57
CDH11P55287 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH11P55287 SNORA17.5-201ENST00000630429 132 ntBASIC5.22□□□□□ -1.57
CDH11P55287 AC119674.1-220ENST00000641502 1048 ntBASIC5.22□□□□□ -1.57
CDH11P55287 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH11P55287 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH11P55287 AL034546.1-201ENST00000623740 3693 ntBASIC5.22□□□□□ -1.57
CDH11P55287 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH11P55287 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH11P55287 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CDH11P55287 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH11P55287 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH11P55287 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH11P55287 AC012254.3-201ENST00000591183 2117 ntBASIC5.21□□□□□ -1.57
CDH11P55287 MFSD8-219ENST00000641228 2559 ntBASIC5.21□□□□□ -1.57
CDH11P55287 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH11P55287 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH11P55287 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH11P55287 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH11P55287 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CDH11P55287 OR52B3P-201ENST00000314715 928 ntBASIC5.21□□□□□ -1.58
CDH11P55287 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH11P55287 SNORA5.1-201ENST00000384275 131 ntBASIC5.21□□□□□ -1.58
CDH11P55287 AL589655.1-201ENST00000405398 482 ntBASIC5.21□□□□□ -1.58
CDH11P55287 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH11P55287 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH11P55287 BX284632.2-201ENST00000421091 399 ntBASIC5.21□□□□□ -1.58
CDH11P55287 RPL23AP19-201ENST00000436229 369 ntBASIC5.21□□□□□ -1.58
CDH11P55287 TUBB4BP6-201ENST00000437576 479 ntBASIC5.21□□□□□ -1.58
CDH11P55287 AP000949.1-201ENST00000438328 629 ntBASIC5.21□□□□□ -1.58
CDH11P55287 AL391987.1-201ENST00000441025 200 ntBASIC5.21□□□□□ -1.58
CDH11P55287 AL512605.1-202ENST00000441919 381 ntBASIC5.21□□□□□ -1.58
CDH11P55287 AL359955.2-201ENST00000445380 353 ntBASIC5.21□□□□□ -1.58
CDH11P55287 RPL31P15-201ENST00000449770 338 ntBASIC5.21□□□□□ -1.58
CDH11P55287 MTND5P8-201ENST00000449817 1083 ntBASIC5.21□□□□□ -1.58
CDH11P55287 OR2AF1P-201ENST00000454899 889 ntBASIC5.21□□□□□ -1.58
CDH11P55287 NXT1P1-201ENST00000458481 316 ntBASIC5.21□□□□□ -1.58
CDH11P55287 AC023245.1-201ENST00000468501 517 ntBASIC5.21□□□□□ -1.58
CDH11P55287 AC007998.1-201ENST00000474156 672 ntBASIC5.21□□□□□ -1.58
CDH11P55287 AC016687.1-201ENST00000482574 353 ntBASIC5.21□□□□□ -1.58
CDH11P55287 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.21□□□□□ -1.58
CDH11P55287 OR9N1P-201ENST00000491296 333 ntBASIC5.21□□□□□ -1.58
CDH11P55287 PSMA2P2-201ENST00000504319 686 ntBASIC5.21□□□□□ -1.58
CDH11P55287 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH11P55287 MTATP6P1-201ENST00000514057 681 ntBASIC5.21□□□□□ -1.58
CDH11P55287 SNORD46.2-201ENST00000516021 102 ntBASIC5.21□□□□□ -1.58
CDH11P55287 RNU6-760P-201ENST00000516078 97 ntBASIC5.21□□□□□ -1.58
CDH11P55287 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.21□□□□□ -1.58
CDH11P55287 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.21□□□□□ -1.58
CDH11P55287 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH11P55287 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.21□□□□□ -1.58
CDH11P55287 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH11P55287 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH11P55287 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH11P55287 AC027281.1-201ENST00000574178 758 ntBASIC5.21□□□□□ -1.58
CDH11P55287 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.21□□□□□ -1.58
CDH11P55287 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH11P55287 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH11P55287 OR51C1P-201ENST00000608504 942 ntBASIC5.21□□□□□ -1.58
CDH11P55287 MIR6862-1-201ENST00000613016 70 ntBASIC5.21□□□□□ -1.58
CDH11P55287 AL021918.2-201ENST00000613415 194 ntBASIC5.21□□□□□ -1.58
CDH11P55287 MIR6862-2-201ENST00000614755 70 ntBASIC5.21□□□□□ -1.58
CDH11P55287 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.21□□□□□ -1.58
CDH11P55287 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH11P55287 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH11P55287 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH11P55287 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH11P55287 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH11P55287 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH11P55287 KARSP1-201ENST00000451871 1752 ntBASIC5.21□□□□□ -1.58
CDH11P55287 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH11P55287 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH11P55287 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH11P55287 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH11P55287 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms