Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.07□□□□□ -1.44
VCPP55072 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.07□□□□□ -1.44
VCPP55072 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.07□□□□□ -1.44
VCPP55072 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
VCPP55072 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.07□□□□□ -1.44
VCPP55072 RNU6-615P-201ENST00000516065 106 ntBASIC6.07□□□□□ -1.44
VCPP55072 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.07□□□□□ -1.44
VCPP55072 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VCPP55072 OR1F2P-201ENST00000570470 933 ntBASIC6.07□□□□□ -1.44
VCPP55072 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
VCPP55072 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
VCPP55072 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.07□□□□□ -1.44
VCPP55072 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.07□□□□□ -1.44
VCPP55072 AL139407.1-201ENST00000613826 1175 ntBASIC6.07□□□□□ -1.44
VCPP55072 MIR8080-201ENST00000622224 89 ntBASIC6.07□□□□□ -1.44
VCPP55072 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.07□□□□□ -1.44
VCPP55072 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
VCPP55072 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VCPP55072 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
VCPP55072 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
VCPP55072 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
VCPP55072 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
VCPP55072 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
VCPP55072 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
VCPP55072 AC004076.2-201ENST00000620532 3323 ntBASIC6.07□□□□□ -1.44
VCPP55072 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VCPP55072 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VCPP55072 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.07□□□□□ -1.44
VCPP55072 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VCPP55072 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.06□□□□□ -1.44
VCPP55072 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
VCPP55072 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VCPP55072 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VCPP55072 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VCPP55072 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VCPP55072 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
VCPP55072 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VCPP55072 RPL11P3-201ENST00000395256 523 ntBASIC6.06□□□□□ -1.44
VCPP55072 NPM1P37-201ENST00000403105 874 ntBASIC6.06□□□□□ -1.44
VCPP55072 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.06□□□□□ -1.44
VCPP55072 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.06□□□□□ -1.44
VCPP55072 VN1R54P-201ENST00000435210 1049 ntBASIC6.06□□□□□ -1.44
VCPP55072 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.06□□□□□ -1.44
VCPP55072 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.06□□□□□ -1.44
VCPP55072 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.06□□□□□ -1.44
VCPP55072 AC072052.1-201ENST00000496556 306 ntBASIC6.06□□□□□ -1.44
VCPP55072 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.06□□□□□ -1.44
VCPP55072 AC138409.2-202ENST00000507274 458 ntBASIC6.06□□□□□ -1.44
VCPP55072 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.06□□□□□ -1.44
VCPP55072 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.06□□□□□ -1.44
VCPP55072 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.06□□□□□ -1.44
VCPP55072 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.06□□□□□ -1.44
VCPP55072 IGBP1P1-201ENST00000554337 1009 ntBASIC6.06□□□□□ -1.44
VCPP55072 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.06□□□□□ -1.44
VCPP55072 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.06□□□□□ -1.44
VCPP55072 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.06□□□□□ -1.44
VCPP55072 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.06□□□□□ -1.44
VCPP55072 SUGT1P3-202ENST00000604259 383 ntBASIC6.06□□□□□ -1.44
VCPP55072 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.06□□□□□ -1.44
VCPP55072 AC007683.2-201ENST00000624681 714 ntBASIC6.06□□□□□ -1.44
VCPP55072 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.06□□□□□ -1.44
VCPP55072 AC136428.4-201ENST00000634254 1155 ntBASIC6.06□□□□□ -1.44
VCPP55072 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
VCPP55072 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VCPP55072 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VCPP55072 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
VCPP55072 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VCPP55072 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
VCPP55072 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VCPP55072 MTCO1P7-201ENST00000419523 1542 ntBASIC6.05□□□□□ -1.44
VCPP55072 AL161912.4-201ENST00000623889 2468 ntBASIC6.05□□□□□ -1.44
VCPP55072 MFSD8-239ENST00000641590 2479 ntBASIC6.05□□□□□ -1.44
VCPP55072 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VCPP55072 AC239868.2-201ENST00000564237 4527 ntBASIC6.05□□□□□ -1.44
VCPP55072 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VCPP55072 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
VCPP55072 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.05□□□□□ -1.44
VCPP55072 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
VCPP55072 U8.4-201ENST00000363626 134 ntBASIC6.05□□□□□ -1.44
VCPP55072 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
VCPP55072 AL354868.1-201ENST00000417077 482 ntBASIC6.05□□□□□ -1.44
VCPP55072 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.05□□□□□ -1.44
VCPP55072 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.05□□□□□ -1.44
VCPP55072 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.05□□□□□ -1.44
VCPP55072 OR7E116P-201ENST00000448529 957 ntBASIC6.05□□□□□ -1.44
VCPP55072 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.05□□□□□ -1.44
VCPP55072 AC108751.3-201ENST00000461814 1020 ntBASIC6.05□□□□□ -1.44
VCPP55072 RN7SL222P-201ENST00000476452 299 ntBASIC6.05□□□□□ -1.44
VCPP55072 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.05□□□□□ -1.44
VCPP55072 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VCPP55072 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.05□□□□□ -1.44
VCPP55072 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.05□□□□□ -1.44
VCPP55072 DPPA2P4-201ENST00000563717 878 ntBASIC6.05□□□□□ -1.44
VCPP55072 AC090286.3-201ENST00000573133 187 ntBASIC6.05□□□□□ -1.44
VCPP55072 MIR4697-201ENST00000582977 78 ntBASIC6.05□□□□□ -1.44
VCPP55072 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.05□□□□□ -1.44
VCPP55072 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.05□□□□□ -1.44
VCPP55072 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.05□□□□□ -1.44
VCPP55072 AL139099.4-201ENST00000614802 114 ntBASIC6.05□□□□□ -1.44
VCPP55072 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms