Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
LHX1P48742 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
LHX1P48742 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LHX1P48742 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LHX1P48742 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LHX1P48742 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LHX1P48742 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LHX1P48742 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.82□□□□□ -1.48
LHX1P48742 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
LHX1P48742 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LHX1P48742 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
LHX1P48742 RNU1-77P-201ENST00000390868 162 ntBASIC5.82□□□□□ -1.48
LHX1P48742 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.82□□□□□ -1.48
LHX1P48742 AL390774.1-201ENST00000411924 246 ntBASIC5.82□□□□□ -1.48
LHX1P48742 AP000534.2-201ENST00000412729 568 ntBASIC5.82□□□□□ -1.48
LHX1P48742 RPSAP35-201ENST00000413753 818 ntBASIC5.82□□□□□ -1.48
LHX1P48742 MTND4LP21-201ENST00000415303 295 ntBASIC5.82□□□□□ -1.48
LHX1P48742 AC244453.4-201ENST00000419150 388 ntBASIC5.82□□□□□ -1.48
LHX1P48742 SRSF1P1-201ENST00000424058 520 ntBASIC5.82□□□□□ -1.48
LHX1P48742 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.82□□□□□ -1.48
LHX1P48742 CYCSP6-201ENST00000434498 302 ntBASIC5.82□□□□□ -1.48
LHX1P48742 AC073072.2-201ENST00000447425 348 ntBASIC5.82□□□□□ -1.48
LHX1P48742 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.82□□□□□ -1.48
LHX1P48742 AL606490.1-201ENST00000452266 765 ntBASIC5.82□□□□□ -1.48
LHX1P48742 RN7SL177P-201ENST00000476596 299 ntBASIC5.82□□□□□ -1.48
LHX1P48742 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.82□□□□□ -1.48
LHX1P48742 KCTD9P6-201ENST00000522306 950 ntBASIC5.82□□□□□ -1.48
LHX1P48742 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.82□□□□□ -1.48
LHX1P48742 AL049779.2-201ENST00000553847 315 ntBASIC5.82□□□□□ -1.48
LHX1P48742 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.82□□□□□ -1.48
LHX1P48742 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.82□□□□□ -1.48
LHX1P48742 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.82□□□□□ -1.48
LHX1P48742 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LHX1P48742 AL078595.2-201ENST00000605309 1780 ntBASIC5.82□□□□□ -1.48
LHX1P48742 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.82□□□□□ -1.48
LHX1P48742 AL513548.1-201ENST00000562904 1724 ntBASIC5.82□□□□□ -1.48
LHX1P48742 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LHX1P48742 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
LHX1P48742 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.82□□□□□ -1.48
LHX1P48742 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.82□□□□□ -1.48
LHX1P48742 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LHX1P48742 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.81□□□□□ -1.48
LHX1P48742 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
LHX1P48742 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.81□□□□□ -1.48
LHX1P48742 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
LHX1P48742 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LHX1P48742 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.81□□□□□ -1.48
LHX1P48742 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LHX1P48742 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LHX1P48742 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LHX1P48742 AC092681.1-201ENST00000297369 291 ntBASIC5.81□□□□□ -1.48
LHX1P48742 RNA5SP183-201ENST00000362452 119 ntBASIC5.81□□□□□ -1.48
LHX1P48742 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LHX1P48742 DSTNP5-201ENST00000427921 523 ntBASIC5.81□□□□□ -1.48
LHX1P48742 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.81□□□□□ -1.48
LHX1P48742 RPL7L1P9-201ENST00000431298 745 ntBASIC5.81□□□□□ -1.48
LHX1P48742 GSTM5P1-201ENST00000434751 660 ntBASIC5.81□□□□□ -1.48
LHX1P48742 AL590399.4-201ENST00000436561 601 ntBASIC5.81□□□□□ -1.48
LHX1P48742 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.81□□□□□ -1.48
LHX1P48742 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LHX1P48742 COPS8P2-201ENST00000473228 627 ntBASIC5.81□□□□□ -1.48
LHX1P48742 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LHX1P48742 RN7SL214P-201ENST00000487317 265 ntBASIC5.81□□□□□ -1.48
LHX1P48742 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.81□□□□□ -1.48
LHX1P48742 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.81□□□□□ -1.48
LHX1P48742 AC126177.5-201ENST00000549599 178 ntBASIC5.81□□□□□ -1.48
LHX1P48742 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.81□□□□□ -1.48
LHX1P48742 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.81□□□□□ -1.48
LHX1P48742 VN1R81P-201ENST00000602085 372 ntBASIC5.81□□□□□ -1.48
LHX1P48742 AL391597.1-201ENST00000618707 694 ntBASIC5.81□□□□□ -1.48
LHX1P48742 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.81□□□□□ -1.48
LHX1P48742 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.81□□□□□ -1.48
LHX1P48742 AC004808.2-201ENST00000627965 773 ntBASIC5.81□□□□□ -1.48
LHX1P48742 AC136428.4-201ENST00000634254 1155 ntBASIC5.81□□□□□ -1.48
LHX1P48742 AC074101.1-201ENST00000637861 241 ntBASIC5.81□□□□□ -1.48
LHX1P48742 AC079776.5-201ENST00000641920 211 ntBASIC5.81□□□□□ -1.48
LHX1P48742 AC120036.2-201ENST00000509729 1474 ntBASIC5.81□□□□□ -1.48
LHX1P48742 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LHX1P48742 THAP12P8-201ENST00000447914 2115 ntBASIC5.81□□□□□ -1.48
LHX1P48742 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LHX1P48742 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.81□□□□□ -1.48
LHX1P48742 AC140479.2-201ENST00000421567 3130 ntBASIC5.81□□□□□ -1.48
LHX1P48742 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LHX1P48742 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LHX1P48742 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
LHX1P48742 AP002512.4-202ENST00000641599 4530 ntBASIC5.8□□□□□ -1.48
LHX1P48742 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
LHX1P48742 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.8□□□□□ -1.48
LHX1P48742 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LHX1P48742 MIR133B-201ENST00000362210 119 ntBASIC5.8□□□□□ -1.48
LHX1P48742 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.8□□□□□ -1.48
LHX1P48742 SNORA16A-201ENST00000384342 137 ntBASIC5.8□□□□□ -1.48
LHX1P48742 AC005522.1-201ENST00000395416 346 ntBASIC5.8□□□□□ -1.48
LHX1P48742 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.8□□□□□ -1.48
LHX1P48742 SLC35E1P1-201ENST00000419313 864 ntBASIC5.8□□□□□ -1.48
LHX1P48742 AL355433.1-201ENST00000422804 300 ntBASIC5.8□□□□□ -1.48
LHX1P48742 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.8□□□□□ -1.48
LHX1P48742 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.8□□□□□ -1.48
LHX1P48742 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.8□□□□□ -1.48
LHX1P48742 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms