Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC016839.1-201ENST00000578162 867 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.91□□□□□ -1.46
PTPN9P43378 AC100767.2-201ENST00000604840 693 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN9P43378 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.91□□□□□ -1.46
PTPN9P43378 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
PTPN9P43378 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN9P43378 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.91□□□□□ -1.46
PTPN9P43378 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.91□□□□□ -1.46
PTPN9P43378 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN9P43378 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.91□□□□□ -1.46
PTPN9P43378 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.91□□□□□ -1.46
PTPN9P43378 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN9P43378 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.91□□□□□ -1.46
PTPN9P43378 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.9□□□□□ -1.46
PTPN9P43378 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN9P43378 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN9P43378 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN9P43378 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN9P43378 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN9P43378 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.9□□□□□ -1.46
PTPN9P43378 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
PTPN9P43378 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN9P43378 AC004076.2-201ENST00000620532 3323 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.9□□□□□ -1.46
PTPN9P43378 RNA5SP326-201ENST00000363209 110 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.9□□□□□ -1.46
PTPN9P43378 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN9P43378 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PTPN9P43378 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PTPN9P43378 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.9□□□□□ -1.46
PTPN9P43378 RPS6P23-201ENST00000413224 722 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.9□□□□□ -1.46
PTPN9P43378 AC017078.1-201ENST00000416146 368 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.9□□□□□ -1.46
PTPN9P43378 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.9□□□□□ -1.46
PTPN9P43378 NANOGP9-201ENST00000439890 892 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 MTND2P25-201ENST00000449028 610 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 RPL31P20-201ENST00000449593 360 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.9□□□□□ -1.46
PTPN9P43378 RPS26P24-201ENST00000497656 331 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.9□□□□□ -1.46
PTPN9P43378 RNU6-319P-201ENST00000516025 108 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 RNU6-615P-201ENST00000516065 106 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN9P43378 IGKV2-4-201ENST00000523070 340 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.9□□□□□ -1.46
PTPN9P43378 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.9□□□□□ -1.46
PTPN9P43378 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.9□□□□□ -1.46
PTPN9P43378 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.9□□□□□ -1.46
PTPN9P43378 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.9□□□□□ -1.46
PTPN9P43378 NDUFA5P11-201ENST00000567995 343 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.9□□□□□ -1.46
PTPN9P43378 PPATP2-201ENST00000605635 508 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 AL158211.2-201ENST00000607282 395 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 AC024933.1-201ENST00000608472 348 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.9□□□□□ -1.46
PTPN9P43378 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.9□□□□□ -1.46
PTPN9P43378 AP000240.1-201ENST00000609910 452 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 MIR6778-201ENST00000617912 73 ntBASIC5.9□□□□□ -1.46
PTPN9P43378 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN9P43378 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PTPN9P43378 PWAR1-201ENST00000624188 2414 ntBASIC5.9□□□□□ -1.47
PTPN9P43378 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.9□□□□□ -1.47
PTPN9P43378 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PTPN9P43378 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.9□□□□□ -1.47
PTPN9P43378 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PTPN9P43378 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PTPN9P43378 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PTPN9P43378 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
PTPN9P43378 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
PTPN9P43378 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.9□□□□□ -1.47
PTPN9P43378 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PTPN9P43378 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
PTPN9P43378 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
PTPN9P43378 BRAFP1-201ENST00000445336 2703 ntBASIC5.9□□□□□ -1.47
PTPN9P43378 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
PTPN9P43378 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
PTPN9P43378 AP001002.1-201ENST00000625148 1513 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN9P43378 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN9P43378 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN9P43378 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.89□□□□□ -1.47
PTPN9P43378 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN9P43378 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
PTPN9P43378 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.89□□□□□ -1.47
PTPN9P43378 GAPDHP24-201ENST00000328713 983 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 OR56A4-201ENST00000330728 1209 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 RNA5SP131-201ENST00000365452 119 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.89□□□□□ -1.47
PTPN9P43378 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.89□□□□□ -1.47
PTPN9P43378 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN9P43378 SEPT7P8-201ENST00000413308 775 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.89□□□□□ -1.47
PTPN9P43378 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.89□□□□□ -1.47
PTPN9P43378 RPS3P2-201ENST00000421346 701 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 AC113412.1-201ENST00000425840 504 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms