Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC003973.3-201ENST00000624863 2822 ntBASIC5.55□□□□□ -1.52
FDFT1P37268 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.55□□□□□ -1.52
FDFT1P37268 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
FDFT1P37268 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
FDFT1P37268 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FDFT1P37268 AC015689.2-201ENST00000528172 1738 ntBASIC5.54□□□□□ -1.52
FDFT1P37268 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FDFT1P37268 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.54□□□□□ -1.52
FDFT1P37268 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FDFT1P37268 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.54□□□□□ -1.52
FDFT1P37268 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
FDFT1P37268 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FDFT1P37268 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.54□□□□□ -1.52
FDFT1P37268 RNA5SP46-201ENST00000362370 120 ntBASIC5.54□□□□□ -1.52
FDFT1P37268 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
FDFT1P37268 DBIP1-201ENST00000401435 260 ntBASIC5.54□□□□□ -1.52
FDFT1P37268 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
FDFT1P37268 BMS1P17-202ENST00000416720 316 ntBASIC5.54□□□□□ -1.52
FDFT1P37268 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.54□□□□□ -1.52
FDFT1P37268 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.54□□□□□ -1.52
FDFT1P37268 HSPD1P12-201ENST00000429127 1069 ntBASIC5.54□□□□□ -1.52
FDFT1P37268 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.54□□□□□ -1.52
FDFT1P37268 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.54□□□□□ -1.52
FDFT1P37268 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.54□□□□□ -1.52
FDFT1P37268 AC090804.1-201ENST00000448870 490 ntBASIC5.54□□□□□ -1.52
FDFT1P37268 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.54□□□□□ -1.52
FDFT1P37268 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.54□□□□□ -1.52
FDFT1P37268 AC098976.1-201ENST00000513014 541 ntBASIC5.54□□□□□ -1.52
FDFT1P37268 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FDFT1P37268 OR8G3P-201ENST00000533406 921 ntBASIC5.54□□□□□ -1.52
FDFT1P37268 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.54□□□□□ -1.52
FDFT1P37268 AL049872.1-201ENST00000556323 322 ntBASIC5.54□□□□□ -1.52
FDFT1P37268 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.54□□□□□ -1.52
FDFT1P37268 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.54□□□□□ -1.52
FDFT1P37268 AL365181.4-201ENST00000609800 547 ntBASIC5.54□□□□□ -1.52
FDFT1P37268 AC244107.2-201ENST00000611773 76 ntBASIC5.54□□□□□ -1.52
FDFT1P37268 AL118522.2-201ENST00000616045 615 ntBASIC5.54□□□□□ -1.52
FDFT1P37268 AC109583.2-201ENST00000617367 129 ntBASIC5.54□□□□□ -1.52
FDFT1P37268 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
FDFT1P37268 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.54□□□□□ -1.52
FDFT1P37268 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FDFT1P37268 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FDFT1P37268 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FDFT1P37268 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
FDFT1P37268 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
FDFT1P37268 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
FDFT1P37268 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.54□□□□□ -1.52
FDFT1P37268 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FDFT1P37268 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
FDFT1P37268 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.53□□□□□ -1.52
FDFT1P37268 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
FDFT1P37268 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FDFT1P37268 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
FDFT1P37268 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FDFT1P37268 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FDFT1P37268 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
FDFT1P37268 AC079298.1-201ENST00000625026 1619 ntBASIC5.53□□□□□ -1.52
FDFT1P37268 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
FDFT1P37268 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FDFT1P37268 RN7SKP28-201ENST00000364770 305 ntBASIC5.53□□□□□ -1.52
FDFT1P37268 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.53□□□□□ -1.52
FDFT1P37268 LYPLA1P3-201ENST00000402650 695 ntBASIC5.53□□□□□ -1.52
FDFT1P37268 RPL19P16-201ENST00000433839 588 ntBASIC5.53□□□□□ -1.52
FDFT1P37268 HMGN1P2-201ENST00000445197 310 ntBASIC5.53□□□□□ -1.52
FDFT1P37268 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.53□□□□□ -1.52
FDFT1P37268 AL672138.1-201ENST00000450604 1015 ntBASIC5.53□□□□□ -1.52
FDFT1P37268 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
FDFT1P37268 RPL12P24-201ENST00000474907 486 ntBASIC5.53□□□□□ -1.52
FDFT1P37268 RN7SL741P-201ENST00000482473 289 ntBASIC5.53□□□□□ -1.52
FDFT1P37268 PFN1P8-201ENST00000497012 543 ntBASIC5.53□□□□□ -1.52
FDFT1P37268 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.53□□□□□ -1.52
FDFT1P37268 IGKV2-4-201ENST00000523070 340 ntBASIC5.53□□□□□ -1.52
FDFT1P37268 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.53□□□□□ -1.52
FDFT1P37268 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.53□□□□□ -1.52
FDFT1P37268 LSM3P2-201ENST00000551246 273 ntBASIC5.53□□□□□ -1.52
FDFT1P37268 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.53□□□□□ -1.52
FDFT1P37268 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.53□□□□□ -1.52
FDFT1P37268 NMNAT1P5-201ENST00000559657 841 ntBASIC5.53□□□□□ -1.52
FDFT1P37268 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.53□□□□□ -1.52
FDFT1P37268 RN7SL356P-201ENST00000582228 248 ntBASIC5.53□□□□□ -1.52
FDFT1P37268 AC008115.3-201ENST00000614874 549 ntBASIC5.53□□□□□ -1.52
FDFT1P37268 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.53□□□□□ -1.52
FDFT1P37268 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.53□□□□□ -1.52
FDFT1P37268 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
FDFT1P37268 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FDFT1P37268 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.53□□□□□ -1.52
FDFT1P37268 PROS2P-201ENST00000474651 1951 ntBASIC5.53□□□□□ -1.52
FDFT1P37268 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
FDFT1P37268 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
FDFT1P37268 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
FDFT1P37268 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.52□□□□□ -1.53
FDFT1P37268 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
FDFT1P37268 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
FDFT1P37268 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
FDFT1P37268 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
FDFT1P37268 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.52□□□□□ -1.53
FDFT1P37268 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.52□□□□□ -1.53
FDFT1P37268 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.52□□□□□ -1.53
FDFT1P37268 AC107977.1-201ENST00000355745 939 ntBASIC5.52□□□□□ -1.53
FDFT1P37268 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms