Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RNA5SP46-201ENST00000362370 120 ntBASIC5.45□□□□□ -1.54
RPA3P35244 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RPA3P35244 AL031985.1-201ENST00000392713 418 ntBASIC5.45□□□□□ -1.54
RPA3P35244 RPL21P67-201ENST00000402896 478 ntBASIC5.45□□□□□ -1.54
RPA3P35244 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.45□□□□□ -1.54
RPA3P35244 SDHDP6-201ENST00000414693 480 ntBASIC5.45□□□□□ -1.54
RPA3P35244 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.45□□□□□ -1.54
RPA3P35244 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.45□□□□□ -1.54
RPA3P35244 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.45□□□□□ -1.54
RPA3P35244 AC006335.2-201ENST00000437993 330 ntBASIC5.45□□□□□ -1.54
RPA3P35244 Z84478.1-201ENST00000438230 1219 ntBASIC5.45□□□□□ -1.54
RPA3P35244 AL450996.1-201ENST00000445574 1202 ntBASIC5.45□□□□□ -1.54
RPA3P35244 EEF1B2P6-201ENST00000445713 673 ntBASIC5.45□□□□□ -1.54
RPA3P35244 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.45□□□□□ -1.54
RPA3P35244 HMGN1P36-201ENST00000446623 298 ntBASIC5.45□□□□□ -1.54
RPA3P35244 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.45□□□□□ -1.54
RPA3P35244 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.45□□□□□ -1.54
RPA3P35244 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.45□□□□□ -1.54
RPA3P35244 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.45□□□□□ -1.54
RPA3P35244 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.45□□□□□ -1.54
RPA3P35244 AL049872.1-201ENST00000556323 322 ntBASIC5.45□□□□□ -1.54
RPA3P35244 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.45□□□□□ -1.54
RPA3P35244 AC010547.6-201ENST00000571789 193 ntBASIC5.45□□□□□ -1.54
RPA3P35244 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.45□□□□□ -1.54
RPA3P35244 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.45□□□□□ -1.54
RPA3P35244 AC025574.2-201ENST00000615621 514 ntBASIC5.45□□□□□ -1.54
RPA3P35244 AC016542.2-201ENST00000624201 619 ntBASIC5.45□□□□□ -1.54
RPA3P35244 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.45□□□□□ -1.54
RPA3P35244 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.45□□□□□ -1.54
RPA3P35244 AC114786.1-201ENST00000512892 1415 ntBASIC5.45□□□□□ -1.54
RPA3P35244 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RPA3P35244 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RPA3P35244 RNF19BPY-201ENST00000458209 1550 ntBASIC5.45□□□□□ -1.54
RPA3P35244 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.45□□□□□ -1.54
RPA3P35244 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
RPA3P35244 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RPA3P35244 AC022417.1-201ENST00000624768 1303 ntBASIC5.45□□□□□ -1.54
RPA3P35244 YES1P1-201ENST00000418510 1628 ntBASIC5.45□□□□□ -1.54
RPA3P35244 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RPA3P35244 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RPA3P35244 AL450345.1-202ENST00000605741 3881 ntBASIC5.44□□□□□ -1.54
RPA3P35244 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
RPA3P35244 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RPA3P35244 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RPA3P35244 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.44□□□□□ -1.54
RPA3P35244 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RPA3P35244 AC211486.3-201ENST00000412694 621 ntBASIC5.44□□□□□ -1.54
RPA3P35244 SUMO2P3-201ENST00000438311 288 ntBASIC5.44□□□□□ -1.54
RPA3P35244 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.44□□□□□ -1.54
RPA3P35244 AL161636.2-201ENST00000445179 927 ntBASIC5.44□□□□□ -1.54
RPA3P35244 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RPA3P35244 PPIAP19-201ENST00000486414 492 ntBASIC5.44□□□□□ -1.54
RPA3P35244 RPS12P31-201ENST00000491419 398 ntBASIC5.44□□□□□ -1.54
RPA3P35244 RPL15P21-201ENST00000495592 567 ntBASIC5.44□□□□□ -1.54
RPA3P35244 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.44□□□□□ -1.54
RPA3P35244 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.44□□□□□ -1.54
RPA3P35244 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.44□□□□□ -1.54
RPA3P35244 AC100784.1-201ENST00000522790 310 ntBASIC5.44□□□□□ -1.54
RPA3P35244 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RPA3P35244 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.44□□□□□ -1.54
RPA3P35244 RBM22P12-201ENST00000567098 1255 ntBASIC5.44□□□□□ -1.54
RPA3P35244 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.44□□□□□ -1.54
RPA3P35244 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.44□□□□□ -1.54
RPA3P35244 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.44□□□□□ -1.54
RPA3P35244 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.44□□□□□ -1.54
RPA3P35244 AC244107.2-201ENST00000611773 76 ntBASIC5.44□□□□□ -1.54
RPA3P35244 AC008115.3-201ENST00000614874 549 ntBASIC5.44□□□□□ -1.54
RPA3P35244 AC099654.6-201ENST00000636487 512 ntBASIC5.44□□□□□ -1.54
RPA3P35244 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.44□□□□□ -1.54
RPA3P35244 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.44□□□□□ -1.54
RPA3P35244 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RPA3P35244 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.44□□□□□ -1.54
RPA3P35244 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
RPA3P35244 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RPA3P35244 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
RPA3P35244 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RPA3P35244 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
RPA3P35244 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RPA3P35244 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RPA3P35244 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RPA3P35244 AC004817.4-201ENST00000602396 3625 ntBASIC5.43□□□□□ -1.54
RPA3P35244 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RPA3P35244 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RPA3P35244 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RPA3P35244 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.43□□□□□ -1.54
RPA3P35244 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RPA3P35244 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.43□□□□□ -1.54
RPA3P35244 RNA5SP131-201ENST00000365452 119 ntBASIC5.43□□□□□ -1.54
RPA3P35244 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RPA3P35244 RNA5SP122-201ENST00000384457 108 ntBASIC5.43□□□□□ -1.54
RPA3P35244 RNA5SP178-201ENST00000410380 128 ntBASIC5.43□□□□□ -1.54
RPA3P35244 RN7SKP286-201ENST00000410894 299 ntBASIC5.43□□□□□ -1.54
RPA3P35244 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.43□□□□□ -1.54
RPA3P35244 KATNBL1P2-201ENST00000433311 835 ntBASIC5.43□□□□□ -1.54
RPA3P35244 AC002504.1-201ENST00000438281 691 ntBASIC5.43□□□□□ -1.54
RPA3P35244 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.43□□□□□ -1.54
RPA3P35244 AL450023.1-201ENST00000450868 751 ntBASIC5.43□□□□□ -1.54
RPA3P35244 YWHAEP1-201ENST00000453697 763 ntBASIC5.43□□□□□ -1.54
RPA3P35244 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.43□□□□□ -1.54
RPA3P35244 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms