Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.99□□□□□ -1.29
COL3A1P02461 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.99□□□□□ -1.29
COL3A1P02461 RPAP2P1-201ENST00000603626 1168 ntBASIC6.99□□□□□ -1.29
COL3A1P02461 AC011626.1-201ENST00000604710 562 ntBASIC6.99□□□□□ -1.29
COL3A1P02461 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
COL3A1P02461 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.99□□□□□ -1.29
COL3A1P02461 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.99□□□□□ -1.29
COL3A1P02461 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL3A1P02461 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.99□□□□□ -1.29
COL3A1P02461 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.99□□□□□ -1.29
COL3A1P02461 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
COL3A1P02461 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL3A1P02461 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.99□□□□□ -1.29
COL3A1P02461 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL3A1P02461 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.99□□□□□ -1.29
COL3A1P02461 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.98□□□□□ -1.29
COL3A1P02461 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.98□□□□□ -1.29
COL3A1P02461 RNU1-74P-201ENST00000384108 171 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 MIR765-201ENST00000390226 114 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.98□□□□□ -1.29
COL3A1P02461 AL354868.1-201ENST00000417077 482 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 DDX39BP1-205ENST00000422507 192 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL3A1P02461 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL3A1P02461 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.98□□□□□ -1.29
COL3A1P02461 AC009127.1-201ENST00000467090 155 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 RPL32P9-201ENST00000487963 407 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 RPL37AP8-201ENST00000494116 276 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 AC097173.1-201ENST00000505862 819 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL3A1P02461 AC024933.1-201ENST00000608472 348 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 AC118658.2-201ENST00000618697 459 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL3A1P02461 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL3A1P02461 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.98□□□□□ -1.29
COL3A1P02461 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.98□□□□□ -1.29
COL3A1P02461 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL3A1P02461 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL3A1P02461 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL3A1P02461 AC114947.2-201ENST00000565748 2125 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL3A1P02461 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.98□□□□□ -1.29
COL3A1P02461 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL3A1P02461 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL3A1P02461 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.98□□□□□ -1.29
COL3A1P02461 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL3A1P02461 AC012213.2-201ENST00000562917 4597 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.98□□□□□ -1.29
COL3A1P02461 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL3A1P02461 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
COL3A1P02461 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
COL3A1P02461 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL3A1P02461 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL3A1P02461 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL3A1P02461 SNORA70-201ENST00000384436 135 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 MTND2P15-201ENST00000418575 892 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 AC017019.1-201ENST00000426129 261 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 RPL7AP61-201ENST00000443410 636 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.98□□□□□ -1.29
COL3A1P02461 RN7SL329P-201ENST00000467740 299 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 IGLV2-34-201ENST00000490007 283 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 GTF2F2P1-201ENST00000511083 675 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.98□□□□□ -1.29
COL3A1P02461 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.98□□□□□ -1.29
COL3A1P02461 RN7SL708P-201ENST00000580952 299 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.98□□□□□ -1.29
COL3A1P02461 MIR4420-201ENST00000583944 77 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 uc_338.7-201ENST00000621834 124 ntBASIC6.98□□□□□ -1.29
COL3A1P02461 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.98□□□□□ -1.29
COL3A1P02461 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.98□□□□□ -1.29
COL3A1P02461 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL3A1P02461 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
COL3A1P02461 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL3A1P02461 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.97□□□□□ -1.29
COL3A1P02461 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL3A1P02461 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
COL3A1P02461 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
COL3A1P02461 RNU1-19P-201ENST00000363306 165 ntBASIC6.97□□□□□ -1.29
COL3A1P02461 RNA5SP90-201ENST00000364801 99 ntBASIC6.97□□□□□ -1.29
COL3A1P02461 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL3A1P02461 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.97□□□□□ -1.29
COL3A1P02461 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.97□□□□□ -1.29
COL3A1P02461 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.97□□□□□ -1.29
COL3A1P02461 BX323845.1-201ENST00000432417 179 ntBASIC6.97□□□□□ -1.29
COL3A1P02461 NPM1P18-201ENST00000434232 732 ntBASIC6.97□□□□□ -1.29
COL3A1P02461 AL359265.1-201ENST00000440296 795 ntBASIC6.97□□□□□ -1.29
COL3A1P02461 MTND2P39-201ENST00000457230 764 ntBASIC6.97□□□□□ -1.29
COL3A1P02461 RN7SL197P-201ENST00000466981 299 ntBASIC6.97□□□□□ -1.29
COL3A1P02461 RN7SL591P-201ENST00000496150 292 ntBASIC6.97□□□□□ -1.29
COL3A1P02461 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.97□□□□□ -1.29
COL3A1P02461 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.97□□□□□ -1.29
COL3A1P02461 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.97□□□□□ -1.29
COL3A1P02461 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.97□□□□□ -1.29
COL3A1P02461 MIR4691-201ENST00000583764 85 ntBASIC6.97□□□□□ -1.29
COL3A1P02461 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.97□□□□□ -1.29
COL3A1P02461 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.97□□□□□ -1.29
COL3A1P02461 AC211433.2-201ENST00000608433 387 ntBASIC6.97□□□□□ -1.29
COL3A1P02461 AL121612.2-201ENST00000612261 482 ntBASIC6.97□□□□□ -1.29
COL3A1P02461 AF117829.2-201ENST00000619538 361 ntBASIC6.97□□□□□ -1.29
COL3A1P02461 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms