Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TMSB4XP2-201ENST00000335179 210 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 RN7SKP6-201ENST00000364795 319 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.3□□□□□ -1.72
SSSCA1O60232 MIR589-201ENST00000385238 99 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 RPL10P10-201ENST00000403509 664 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 RPS3AP2-201ENST00000407190 754 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.3□□□□□ -1.72
SSSCA1O60232 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.3□□□□□ -1.72
SSSCA1O60232 OR5M12P-201ENST00000423388 929 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 OR2AH1P-201ENST00000425717 928 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.3□□□□□ -1.72
SSSCA1O60232 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.3□□□□□ -1.72
SSSCA1O60232 RPL12P17-201ENST00000432393 498 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.3□□□□□ -1.72
SSSCA1O60232 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.3□□□□□ -1.72
SSSCA1O60232 PNKDP1-201ENST00000435914 430 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 OR6D1P-201ENST00000436165 939 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 NDUFS5P5-201ENST00000437256 321 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.3□□□□□ -1.72
SSSCA1O60232 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.3□□□□□ -1.72
SSSCA1O60232 RPL12P49-201ENST00000441100 121 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 AC007383.1-201ENST00000445875 636 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 PPIAP27-201ENST00000453800 265 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 AP000547.1-201ENST00000454360 617 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.3□□□□□ -1.72
SSSCA1O60232 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSSCA1O60232 CBX1P5-201ENST00000475330 559 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.3□□□□□ -1.72
SSSCA1O60232 MRPS16P1-201ENST00000523462 412 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.3□□□□□ -1.72
SSSCA1O60232 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.3□□□□□ -1.72
SSSCA1O60232 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.3□□□□□ -1.72
SSSCA1O60232 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.3□□□□□ -1.72
SSSCA1O60232 MIR4502-201ENST00000580432 81 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.3□□□□□ -1.72
SSSCA1O60232 AC091167.5-201ENST00000605689 894 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 AC129915.3-201ENST00000634128 948 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 AC103703.1-201ENST00000634783 663 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC4.3□□□□□ -1.72
SSSCA1O60232 AC073869.7-201ENST00000640874 297 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 AC087565.3-203ENST00000641018 837 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 TET1P1-201ENST00000426627 2301 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.3□□□□□ -1.72
SSSCA1O60232 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSSCA1O60232 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSSCA1O60232 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.3□□□□□ -1.72
SSSCA1O60232 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.3□□□□□ -1.72
SSSCA1O60232 STX3-208ENST00000641815 3236 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSSCA1O60232 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SSSCA1O60232 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSSCA1O60232 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSSCA1O60232 MRRFP1-201ENST00000435941 1675 ntBASIC4.29□□□□□ -1.72
SSSCA1O60232 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSSCA1O60232 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.29□□□□□ -1.72
SSSCA1O60232 AC012078.1-201ENST00000405035 1646 ntBASIC4.29□□□□□ -1.72
SSSCA1O60232 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSSCA1O60232 ZNF652P1-201ENST00000442420 1309 ntBASIC4.29□□□□□ -1.72
SSSCA1O60232 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SSSCA1O60232 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.29□□□□□ -1.72
SSSCA1O60232 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SSSCA1O60232 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSSCA1O60232 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SSSCA1O60232 AC011447.7-201ENST00000624228 1590 ntBASIC4.29□□□□□ -1.72
SSSCA1O60232 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSSCA1O60232 RN7SKP74-201ENST00000362849 309 ntBASIC4.29□□□□□ -1.72
SSSCA1O60232 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSSCA1O60232 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SSSCA1O60232 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.29□□□□□ -1.72
SSSCA1O60232 BX323845.3-201ENST00000428215 527 ntBASIC4.29□□□□□ -1.72
SSSCA1O60232 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.29□□□□□ -1.72
SSSCA1O60232 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.29□□□□□ -1.72
SSSCA1O60232 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.29□□□□□ -1.72
SSSCA1O60232 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.29□□□□□ -1.72
SSSCA1O60232 AL161722.1-201ENST00000446972 1032 ntBASIC4.29□□□□□ -1.72
SSSCA1O60232 VDAC2P4-201ENST00000452925 711 ntBASIC4.29□□□□□ -1.72
SSSCA1O60232 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.29□□□□□ -1.72
SSSCA1O60232 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.29□□□□□ -1.72
SSSCA1O60232 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSSCA1O60232 AC106822.1-201ENST00000502647 526 ntBASIC4.29□□□□□ -1.72
SSSCA1O60232 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.29□□□□□ -1.72
SSSCA1O60232 HMGB3P16-201ENST00000508037 287 ntBASIC4.29□□□□□ -1.72
SSSCA1O60232 LDHAP1-201ENST00000509421 992 ntBASIC4.29□□□□□ -1.72
SSSCA1O60232 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC4.29□□□□□ -1.72
SSSCA1O60232 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.29□□□□□ -1.72
SSSCA1O60232 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.29□□□□□ -1.72
SSSCA1O60232 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.29□□□□□ -1.72
SSSCA1O60232 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.29□□□□□ -1.72
SSSCA1O60232 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.29□□□□□ -1.72
SSSCA1O60232 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.29□□□□□ -1.72
SSSCA1O60232 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSSCA1O60232 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SSSCA1O60232 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.29□□□□□ -1.72
SSSCA1O60232 RN7SL435P-201ENST00000584418 282 ntBASIC4.29□□□□□ -1.72
SSSCA1O60232 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.29□□□□□ -1.72
SSSCA1O60232 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC4.29□□□□□ -1.72
SSSCA1O60232 AC124916.2-201ENST00000604416 224 ntBASIC4.29□□□□□ -1.72
SSSCA1O60232 AC011626.1-201ENST00000604710 562 ntBASIC4.29□□□□□ -1.72
SSSCA1O60232 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSSCA1O60232 MIR6721-201ENST00000617181 87 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 374.6 ms