Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 GUCY1B2-204ENST00000531898 1979 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.04□□□□□ -1.44
TRIM38O00635 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM38O00635 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM38O00635 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM38O00635 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM38O00635 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
TRIM38O00635 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM38O00635 OR52B3P-201ENST00000314715 928 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM38O00635 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM38O00635 RPA2P2-201ENST00000419698 796 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM38O00635 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM38O00635 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM38O00635 PA2G4P6-201ENST00000438325 1197 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM38O00635 MOB1AP2-201ENST00000446060 614 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 AC069277.2-201ENST00000454211 432 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 AC011476.1-201ENST00000466725 307 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM38O00635 NPM1P29-201ENST00000483112 803 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 RN7SL193P-201ENST00000491708 276 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM38O00635 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM38O00635 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM38O00635 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.04□□□□□ -1.44
TRIM38O00635 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM38O00635 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM38O00635 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM38O00635 MTCYBP19-201ENST00000517463 1124 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM38O00635 AC004923.2-201ENST00000529649 369 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
TRIM38O00635 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM38O00635 AC087888.1-201ENST00000550884 1254 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM38O00635 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM38O00635 AC092121.1-201ENST00000569452 202 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM38O00635 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM38O00635 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM38O00635 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM38O00635 NPIPB1P-202ENST00000588786 828 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 AC006116.7-201ENST00000590141 756 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM38O00635 AP001033.2-201ENST00000609701 1003 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 AC126175.1-201ENST00000617041 758 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 AC096708.4-201ENST00000620563 552 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM38O00635 AC003992.1-201ENST00000635364 557 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 FRG1DP-201ENST00000635586 771 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 AC000095.2-202ENST00000637415 154 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM38O00635 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM38O00635 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM38O00635 MTCO1P4-201ENST00000520516 1409 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM38O00635 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM38O00635 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM38O00635 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
TRIM38O00635 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
TRIM38O00635 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
TRIM38O00635 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM38O00635 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM38O00635 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
TRIM38O00635 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM38O00635 AC079298.1-201ENST00000625026 1619 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
TRIM38O00635 DNM1P47-203ENST00000571780 12667 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM38O00635 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
TRIM38O00635 AC022325.1-201ENST00000502748 2199 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
TRIM38O00635 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM38O00635 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM38O00635 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM38O00635 AF287957.1-201ENST00000607368 1595 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM38O00635 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM38O00635 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM38O00635 RNU4-7P-201ENST00000364758 141 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM38O00635 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TRIM38O00635 RNU6-729P-201ENST00000384399 107 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 MIR433-201ENST00000384837 93 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 ATP5F1P6-201ENST00000402768 767 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 AL096711.1-201ENST00000404780 554 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 RNA5SP178-201ENST00000410380 128 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 Z68694.1-201ENST00000413929 841 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM38O00635 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM38O00635 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM38O00635 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM38O00635 AC006065.1-201ENST00000422539 802 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM38O00635 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM38O00635 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM38O00635 NDUFS5P5-201ENST00000437256 321 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms