Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1AO00322 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1AO00322 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.11□□□□□ -1.59
UPK1AO00322 VN1R3-201ENST00000418822 919 ntBASIC5.11□□□□□ -1.59
UPK1AO00322 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.11□□□□□ -1.59
UPK1AO00322 TNPO1P1-201ENST00000423641 1138 ntBASIC5.11□□□□□ -1.59
UPK1AO00322 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.11□□□□□ -1.59
UPK1AO00322 RPL31P15-201ENST00000449770 338 ntBASIC5.11□□□□□ -1.59
UPK1AO00322 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1AO00322 COX6B1P2-201ENST00000489624 230 ntBASIC5.11□□□□□ -1.59
UPK1AO00322 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.11□□□□□ -1.59
UPK1AO00322 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.11□□□□□ -1.59
UPK1AO00322 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.11□□□□□ -1.59
UPK1AO00322 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.11□□□□□ -1.59
UPK1AO00322 AC112191.2-201ENST00000522428 333 ntBASIC5.11□□□□□ -1.59
UPK1AO00322 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
UPK1AO00322 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.11□□□□□ -1.59
UPK1AO00322 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.11□□□□□ -1.59
UPK1AO00322 AC008521.2-201ENST00000591021 259 ntBASIC5.11□□□□□ -1.59
UPK1AO00322 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1AO00322 MIR6861-201ENST00000618657 64 ntBASIC5.11□□□□□ -1.59
UPK1AO00322 AC127024.6-201ENST00000621598 424 ntBASIC5.11□□□□□ -1.59
UPK1AO00322 AC132068.1-201ENST00000623805 459 ntBASIC5.11□□□□□ -1.59
UPK1AO00322 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.11□□□□□ -1.59
UPK1AO00322 SAMMSON-227ENST00000642114 1199 ntBASIC5.11□□□□□ -1.59
UPK1AO00322 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
UPK1AO00322 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.11□□□□□ -1.59
UPK1AO00322 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
UPK1AO00322 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.11□□□□□ -1.59
UPK1AO00322 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.11□□□□□ -1.59
UPK1AO00322 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1AO00322 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1AO00322 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1AO00322 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1AO00322 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1AO00322 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1AO00322 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1AO00322 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
UPK1AO00322 OOSP1-201ENST00000398992 1270 ntBASIC5.1□□□□□ -1.59
UPK1AO00322 CTSL3P-202ENST00000412179 788 ntBASIC5.1□□□□□ -1.59
UPK1AO00322 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1AO00322 CDY17P-201ENST00000414121 1282 ntBASIC5.1□□□□□ -1.59
UPK1AO00322 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.1□□□□□ -1.59
UPK1AO00322 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
UPK1AO00322 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1AO00322 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.1□□□□□ -1.59
UPK1AO00322 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.1□□□□□ -1.59
UPK1AO00322 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.1□□□□□ -1.59
UPK1AO00322 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1AO00322 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.1□□□□□ -1.59
UPK1AO00322 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.1□□□□□ -1.59
UPK1AO00322 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.1□□□□□ -1.59
UPK1AO00322 AC100784.1-201ENST00000522790 310 ntBASIC5.1□□□□□ -1.59
UPK1AO00322 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.1□□□□□ -1.59
UPK1AO00322 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.1□□□□□ -1.59
UPK1AO00322 MIR1273E-201ENST00000581165 102 ntBASIC5.1□□□□□ -1.59
UPK1AO00322 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1AO00322 AP000769.2-201ENST00000602344 396 ntBASIC5.1□□□□□ -1.59
UPK1AO00322 RN7SL787P-201ENST00000613000 284 ntBASIC5.1□□□□□ -1.59
UPK1AO00322 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1AO00322 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1AO00322 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1AO00322 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1AO00322 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
UPK1AO00322 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
UPK1AO00322 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
UPK1AO00322 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1AO00322 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1AO00322 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
UPK1AO00322 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UPK1AO00322 AL731532.2-201ENST00000623542 1953 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.09□□□□□ -1.59
UPK1AO00322 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 AC022417.1-201ENST00000624768 1303 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
UPK1AO00322 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
UPK1AO00322 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
UPK1AO00322 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UPK1AO00322 TMSB4XP4-201ENST00000323496 618 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UPK1AO00322 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
UPK1AO00322 RN7SKP15-201ENST00000364742 309 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 SNORA16A-201ENST00000384342 137 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 AL031985.1-201ENST00000392713 418 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.09□□□□□ -1.59
UPK1AO00322 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.09□□□□□ -1.59
UPK1AO00322 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.09□□□□□ -1.59
UPK1AO00322 AC002069.1-201ENST00000429649 1159 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 CYCSP51-201ENST00000443545 318 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 AL161636.2-201ENST00000445179 927 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.09□□□□□ -1.59
UPK1AO00322 AC012512.1-201ENST00000446594 718 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
UPK1AO00322 AC073909.1-201ENST00000447112 999 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.09□□□□□ -1.59
UPK1AO00322 AC144530.1-201ENST00000452862 555 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
UPK1AO00322 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.09□□□□□ -1.59
UPK1AO00322 AC109464.1-201ENST00000511091 819 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms