Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.72□□□□□ -1.49
CCDC188H7C350 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC188H7C350 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CCDC188H7C350 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CCDC188H7C350 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC188H7C350 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CCDC188H7C350 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC188H7C350 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
CCDC188H7C350 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC188H7C350 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC188H7C350 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC188H7C350 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CCDC188H7C350 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC188H7C350 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CCDC188H7C350 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC188H7C350 RPL21P67-201ENST00000402896 478 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 AL139039.2-201ENST00000407436 479 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC188H7C350 SEPT7P8-201ENST00000413308 775 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC188H7C350 AL022331.1-201ENST00000429025 477 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 ATP5LP2-201ENST00000440646 311 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 RPL12P49-201ENST00000441100 121 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC188H7C350 AL161722.1-201ENST00000446972 1032 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 MTND6P32-201ENST00000457611 483 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 AC023194.2-201ENST00000465398 406 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 AC005165.2-201ENST00000466070 380 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC188H7C350 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC188H7C350 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC188H7C350 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC188H7C350 AC008126.1-201ENST00000549019 480 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 OR11H3P-201ENST00000554547 982 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC188H7C350 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC188H7C350 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC188H7C350 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC188H7C350 AC124916.2-201ENST00000604416 224 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 BNIP3P7-201ENST00000605641 516 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC188H7C350 AC025574.2-201ENST00000615621 514 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 AF117829.2-201ENST00000619538 361 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 AC135068.5-201ENST00000624197 983 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
CCDC188H7C350 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC188H7C350 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC188H7C350 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC188H7C350 MAPK10-338ENST00000641647 3362 ntBASIC5.71□□□□□ -1.5
CCDC188H7C350 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC188H7C350 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC188H7C350 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CCDC188H7C350 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC188H7C350 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CCDC188H7C350 AC079298.1-201ENST00000625026 1619 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC188H7C350 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC188H7C350 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC188H7C350 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC188H7C350 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC188H7C350 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC188H7C350 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC188H7C350 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC188H7C350 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC188H7C350 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC188H7C350 MIR365B-201ENST00000362317 111 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 SNORA64.1-201ENST00000362600 132 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 RNU6-618P-201ENST00000363518 112 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC188H7C350 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC188H7C350 PCNPP4-201ENST00000414817 517 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC188H7C350 MTCO1P51-201ENST00000427672 1060 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC188H7C350 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC188H7C350 Z85994.2-201ENST00000434327 452 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC188H7C350 PPIAP27-201ENST00000453800 265 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 CST12P-201ENST00000457644 362 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 AC044810.1-201ENST00000480271 711 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 AC022215.1-201ENST00000481770 362 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 RN7SL741P-201ENST00000482473 289 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC188H7C350 AC106822.1-201ENST00000502647 526 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 AC091874.2-201ENST00000505889 720 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC188H7C350 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC188H7C350 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC188H7C350 AP001284.1-201ENST00000528393 2118 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC188H7C350 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC188H7C350 BTG1P1-201ENST00000540396 508 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC188H7C350 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC188H7C350 AC244107.2-201ENST00000611773 76 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 uc_338.29-201ENST00000615099 168 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC188H7C350 LINC01963-201ENST00000562038 3148 ntBASIC5.7□□□□□ -1.5
CCDC188H7C350 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms