Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AL359265.1-201ENST00000440296 795 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AL596266.1-201ENST00000448132 400 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AZGP1P2-201ENST00000454506 345 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 ATP5G1P3-201ENST00000463301 410 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AC108729.2-201ENST00000476543 840 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 RPL9P15-201ENST00000491096 532 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 MTCO2P9-201ENST00000503214 694 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AC025458.1-201ENST00000506046 166 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 TRIM51DP-201ENST00000529746 596 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AC233266.2-201ENST00000567067 528 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AC104072.1-201ENST00000568817 668 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 MIR4260-201ENST00000583107 67 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AL359091.2-201ENST00000609303 556 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AC104763.3-201ENST00000613765 618 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AC024884.1-201ENST00000620583 399 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 AC017002.4-201ENST00000604721 1525 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 MRE11P1-201ENST00000464884 2127 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.71□□□□□ -1.49
TCRBV7S3A2A0A539 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
TCRBV7S3A2A0A539 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
TCRBV7S3A2A0A539 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 SNORA64.1-201ENST00000362600 132 ntBASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC009784.1-201ENST00000426484 460 ntBASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 RPS23P6-201ENST00000466136 431 ntBASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 OR9N1P-202ENST00000494289 481 ntBASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC112198.4-201ENST00000515450 351 ntBASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC016550.3-201ENST00000515706 767 ntBASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 OR4A17P-201ENST00000526032 904 ntBASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC079064.1-201ENST00000528365 362 ntBASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC068339.2-201ENST00000534395 618 ntBASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 MTATP6P2-201ENST00000603319 678 ntBASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC012213.4-201ENST00000606457 354 ntBASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC097504.2-201ENST00000608088 454 ntBASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC010632.3-201ENST00000611377 369 ntBASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC245389.2-201ENST00000616023 576 ntBASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC242843.1-201ENST00000618702 573 ntBASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AC009269.6-201ENST00000621778 588 ntBASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TCRBV7S3A2A0A539 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms