Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 U3.25-201ENST00000391209 220 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AL354890.1-201ENST00000413730 346 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AC016769.2-201ENST00000414815 475 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 RPL12P43-201ENST00000420608 499 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 RCC2P2-201ENST00000422174 918 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AC026348.1-201ENST00000462549 1053 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 RN7SL352P-201ENST00000466002 277 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AC078857.1-201ENST00000469870 667 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AC093801.2-201ENST00000503966 1050 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 SNORD95-201ENST00000579879 68 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 MIR3176-201ENST00000582210 90 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AC096947.1-201ENST00000603233 470 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AP005431.1-201ENST00000618479 319 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AP000770.2-201ENST00000623694 100 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AC003992.1-201ENST00000635364 557 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 HDAC1P2-201ENST00000453661 1398 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AC097063.1-201ENST00000426714 1797 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 NLRP3P1-201ENST00000622303 1785 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AC092692.1-201ENST00000623625 2595 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 AC232271.1-201ENST00000602455 2715 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 AC119674.1-202ENST00000641333 1860 ntBASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 AL627171.1-201ENST00000618845 1308 ntBASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 OR10R3P-201ENST00000361688 942 ntBASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 NMD3P2-201ENST00000421815 761 ntBASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 MTATP6P17-201ENST00000431030 672 ntBASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 LRRC37A14P-201ENST00000452297 462 ntBASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 NENFP3-201ENST00000503735 313 ntBASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 ASNSP4-201ENST00000511103 447 ntBASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 ATP5LP3-201ENST00000514223 304 ntBASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 VTA1P2-201ENST00000520205 911 ntBASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 AC006530.1-201ENST00000555980 571 ntBASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 KATNBL1P5-201ENST00000605015 517 ntBASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 AL021918.2-201ENST00000613415 194 ntBASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 AL050303.3-201ENST00000613704 284 ntBASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms