Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC087360.1-201ENST00000518788 616 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AP001804.1-201ENST00000526868 919 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 ACER3-213ENST00000533873 929 ntTSL 2 BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AC015802.2-201ENST00000589690 189 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AC083899.3-201ENST00000603413 594 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 IGKV1OR2-9-201ENST00000603957 287 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 IGKV1OR2-11-201ENST00000604120 287 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AC091834.1-201ENST00000614543 472 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AL591926.1-201ENST00000620542 217 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 ATE1-AS1-202ENST00000636460 506 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AL356317.1-201ENST00000396110 1436 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AL137918.1-201ENST00000624542 1922 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AC005839.1-201ENST00000624148 3213 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AC007993.1-201ENST00000621298 2430 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AC095038.1-201ENST00000429248 1591 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AC011815.2-201ENST00000618230 2021 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 RN7SKP107-201ENST00000364157 290 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 RNU6-1318P-201ENST00000365389 103 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 RNU6-1042P-201ENST00000384204 107 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 RNU6-1055P-201ENST00000391085 107 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AL603865.2-201ENST00000401679 213 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 THEM7P-201ENST00000419556 672 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AHCYP8-201ENST00000425108 209 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 Z95152.1-201ENST00000453556 656 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 TSACC-207ENST00000470342 601 ntTSL 2 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AC116917.1-201ENST00000520558 305 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 NPM1P5-201ENST00000557228 838 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AC012414.6-201ENST00000568241 401 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 UBE2L4-201ENST00000587688 464 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 WISP1-OT1-201ENST00000602893 642 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AL050343.2-201ENST00000607338 280 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AC084036.1-201ENST00000609190 508 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AC009233.1-201ENST00000616477 371 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AP003400.2-201ENST00000624036 666 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 AC092821.3-202ENST00000641304 2767 ntBASIC8.95□□□□□ -0.98
PDZRN3Q9UPQ7 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 AC127070.3-201ENST00000503695 3263 ntBASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms