Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.2□□□□□ -1.58
NPIPA1Q9UND3 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
NPIPA1Q9UND3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.2□□□□□ -1.58
NPIPA1Q9UND3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 U3.7-201ENST00000363668 216 ntBASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 AL391422.1-201ENST00000402155 436 ntBASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 AP000534.2-201ENST00000412729 568 ntBASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 OR7E116P-201ENST00000448529 957 ntBASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 AL606490.1-201ENST00000452266 765 ntBASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 LDHBP2-201ENST00000456969 1005 ntBASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 RPL35AP19-201ENST00000469425 329 ntBASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 OR2AO1P-201ENST00000476497 403 ntBASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 NPM1P5-201ENST00000557228 838 ntBASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 AC096996.1-201ENST00000563813 325 ntBASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 AC063977.5-201ENST00000601044 974 ntBASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 RNU6-84P-201ENST00000607737 102 ntBASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 AC211433.2-201ENST00000608433 387 ntBASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 AC096586.2-201ENST00000610260 441 ntBASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 AC090607.5-201ENST00000615692 224 ntBASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 AC000095.2-202ENST00000637415 154 ntBASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 UGT2B24P-201ENST00000514441 1597 ntBASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA1Q9UND3 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 MFSD8-239ENST00000641590 2479 ntBASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 MIR105-2-201ENST00000385083 81 ntBASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 RNA5SP91-201ENST00000390902 119 ntBASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 AL356968.2-201ENST00000412769 1257 ntBASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 AL133173.1-201ENST00000423458 397 ntBASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 AC100832.1-201ENST00000471945 383 ntBASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 RN7SL570P-201ENST00000484405 292 ntBASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 RN7SL547P-201ENST00000490793 290 ntBASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 AC015720.2-201ENST00000567709 334 ntBASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 AP001357.1-201ENST00000586304 1053 ntBASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 HIRAP1-201ENST00000605318 787 ntBASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 NANOGP3-201ENST00000605855 286 ntBASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 AL021707.7-201ENST00000607991 416 ntBASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 AC093388.1-201ENST00000609166 430 ntBASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 AC005840.5-201ENST00000619166 599 ntBASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NPIPA1Q9UND3 AP001284.1-201ENST00000528393 2118 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms