Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 RPS27P20-201ENST00000492051 246 ntBASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 AC107401.1-201ENST00000503426 685 ntBASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 GUSBP9-201ENST00000510138 584 ntBASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 TOMM22P4-201ENST00000511318 336 ntBASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 CYP4F27P-201ENST00000514557 494 ntBASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 AC244502.2-201ENST00000543361 851 ntBASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 AP003717.3-201ENST00000544832 1180 ntBASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 AC092718.4-201ENST00000566639 716 ntBASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 AC005332.4-201ENST00000592752 579 ntBASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 AC012676.3-201ENST00000614983 479 ntBASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 uc_338.29-201ENST00000615099 168 ntBASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 AC090246.1-201ENST00000616499 426 ntBASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 MIR7159-201ENST00000620587 66 ntBASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 AC004232.3-201ENST00000622977 525 ntBASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 AC017037.3-201ENST00000625016 472 ntBASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 AC024587.1-201ENST00000505925 2157 ntBASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 AC009501.3-201ENST00000605001 1352 ntBASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PACSIN3Q9UKS6 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AP000432.2-201ENST00000624164 2048 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 RN7SKP171-201ENST00000364417 303 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 SNORD115-48-201ENST00000364764 76 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 SNORA43.1-201ENST00000364863 140 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 RNA5SP485-201ENST00000365053 119 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AC119751.3-201ENST00000399720 670 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 RN7SKP17-201ENST00000411242 351 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 UBE2V1P11-201ENST00000411559 285 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AL360013.1-201ENST00000419031 858 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AC241520.1-201ENST00000422654 1099 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AL139158.1-201ENST00000424719 340 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 GAPDHP34-201ENST00000432112 823 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AC073410.1-201ENST00000435125 589 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AL359265.1-201ENST00000440296 795 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 SOCS5P1-201ENST00000440415 949 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 OR10R1P-201ENST00000441524 1141 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 SYT14P1-201ENST00000481459 721 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 PPM1AP1-201ENST00000502740 1135 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AC009729.1-201ENST00000548873 1133 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AGGF1P9-201ENST00000561884 913 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AC016839.1-201ENST00000578162 867 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AP001496.3-201ENST00000580230 913 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 WBP1LP12-201ENST00000604449 331 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AL158042.1-201ENST00000605338 460 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 AC107952.2-201ENST00000606048 486 ntBASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.87□□□□□ -1.47
PACSIN3Q9UKS6 HULC.1-201ENST00000612720 240 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms