Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AL391361.1-201ENST00000405580 489 ntBASIC5.7□□□□□ -1.5
CISHQ9NSE2 GPS2P1-201ENST00000411761 986 ntBASIC5.7□□□□□ -1.5
CISHQ9NSE2 RPL35AP24-201ENST00000413846 330 ntBASIC5.7□□□□□ -1.5
CISHQ9NSE2 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.7□□□□□ -1.5
CISHQ9NSE2 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.7□□□□□ -1.5
CISHQ9NSE2 RPS27AP6-201ENST00000427962 448 ntBASIC5.7□□□□□ -1.5
CISHQ9NSE2 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.7□□□□□ -1.5
CISHQ9NSE2 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.7□□□□□ -1.5
CISHQ9NSE2 AC104634.1-201ENST00000452720 462 ntBASIC5.7□□□□□ -1.5
CISHQ9NSE2 AC011225.1-201ENST00000457751 369 ntBASIC5.7□□□□□ -1.5
CISHQ9NSE2 AP000797.2-201ENST00000475768 606 ntBASIC5.7□□□□□ -1.5
CISHQ9NSE2 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.7□□□□□ -1.5
CISHQ9NSE2 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.7□□□□□ -1.5
CISHQ9NSE2 AC097486.1-201ENST00000515331 210 ntBASIC5.7□□□□□ -1.5
CISHQ9NSE2 RNU6-941P-201ENST00000516346 108 ntBASIC5.7□□□□□ -1.5
CISHQ9NSE2 RNA5SP373-201ENST00000517271 95 ntBASIC5.7□□□□□ -1.5
CISHQ9NSE2 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.7□□□□□ -1.5
CISHQ9NSE2 AC130364.2-201ENST00000528639 604 ntBASIC5.7□□□□□ -1.5
CISHQ9NSE2 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CISHQ9NSE2 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.7□□□□□ -1.5
CISHQ9NSE2 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CISHQ9NSE2 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.7□□□□□ -1.5
CISHQ9NSE2 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.7□□□□□ -1.5
CISHQ9NSE2 MIR6837-201ENST00000620884 64 ntBASIC5.7□□□□□ -1.5
CISHQ9NSE2 CASC19-264ENST00000641912 1184 ntBASIC5.7□□□□□ -1.5
CISHQ9NSE2 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CISHQ9NSE2 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CISHQ9NSE2 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CISHQ9NSE2 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 OR55B1P-203ENST00000641518 2602 ntBASIC5.69□□□□□ -1.5
CISHQ9NSE2 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CISHQ9NSE2 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CISHQ9NSE2 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 AC093297.3-201ENST00000607056 2517 ntBASIC5.69□□□□□ -1.5
CISHQ9NSE2 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
CISHQ9NSE2 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 AC124944.2-201ENST00000429866 1242 ntBASIC5.69□□□□□ -1.5
CISHQ9NSE2 FAM96AP1-201ENST00000430879 482 ntBASIC5.69□□□□□ -1.5
CISHQ9NSE2 AC016772.1-201ENST00000444170 1261 ntBASIC5.69□□□□□ -1.5
CISHQ9NSE2 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 AC093827.1-201ENST00000480094 861 ntBASIC5.69□□□□□ -1.5
CISHQ9NSE2 RPSAP51-201ENST00000497462 645 ntBASIC5.69□□□□□ -1.5
CISHQ9NSE2 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CISHQ9NSE2 IMMP1LP3-201ENST00000604197 224 ntBASIC5.69□□□□□ -1.5
CISHQ9NSE2 AC005252.1-201ENST00000604518 1063 ntBASIC5.69□□□□□ -1.5
CISHQ9NSE2 AP000864.1-201ENST00000609424 650 ntBASIC5.69□□□□□ -1.5
CISHQ9NSE2 AC022467.1-201ENST00000614738 749 ntBASIC5.69□□□□□ -1.5
CISHQ9NSE2 RNA5SP439-201ENST00000617595 124 ntBASIC5.69□□□□□ -1.5
CISHQ9NSE2 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 AC074101.1-201ENST00000637861 241 ntBASIC5.69□□□□□ -1.5
CISHQ9NSE2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CISHQ9NSE2 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CISHQ9NSE2 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CISHQ9NSE2 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CISHQ9NSE2 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CISHQ9NSE2 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CISHQ9NSE2 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CISHQ9NSE2 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CISHQ9NSE2 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.68□□□□□ -1.5
CISHQ9NSE2 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.68□□□□□ -1.5
CISHQ9NSE2 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CISHQ9NSE2 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CISHQ9NSE2 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.68□□□□□ -1.5
CISHQ9NSE2 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
CISHQ9NSE2 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.68□□□□□ -1.5
CISHQ9NSE2 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CISHQ9NSE2 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CISHQ9NSE2 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CISHQ9NSE2 RNU1-19P-201ENST00000363306 165 ntBASIC5.68□□□□□ -1.5
CISHQ9NSE2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CISHQ9NSE2 RNU1-149P-201ENST00000390870 161 ntBASIC5.68□□□□□ -1.5
CISHQ9NSE2 AC092642.1-201ENST00000392417 425 ntBASIC5.68□□□□□ -1.5
CISHQ9NSE2 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.68□□□□□ -1.5
CISHQ9NSE2 RPL7AP49-201ENST00000429522 581 ntBASIC5.68□□□□□ -1.5
CISHQ9NSE2 AL591438.1-201ENST00000433508 581 ntBASIC5.68□□□□□ -1.5
CISHQ9NSE2 RPS11P7-201ENST00000442125 465 ntBASIC5.68□□□□□ -1.5
CISHQ9NSE2 AC090804.1-201ENST00000448870 490 ntBASIC5.68□□□□□ -1.5
CISHQ9NSE2 UBA52P7-201ENST00000486088 380 ntBASIC5.68□□□□□ -1.5
CISHQ9NSE2 PGAM1P13-201ENST00000507497 754 ntBASIC5.68□□□□□ -1.5
CISHQ9NSE2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.68□□□□□ -1.5
CISHQ9NSE2 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CISHQ9NSE2 OR51A1P-201ENST00000511110 946 ntBASIC5.68□□□□□ -1.5
CISHQ9NSE2 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.68□□□□□ -1.5
CISHQ9NSE2 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.68□□□□□ -1.5
CISHQ9NSE2 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.68□□□□□ -1.5
CISHQ9NSE2 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CISHQ9NSE2 NMNAT1P5-201ENST00000559657 841 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms