Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AF287957.1-201ENST00000607368 1595 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 AC027088.4-201ENST00000611559 1947 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 RNU6-792P-201ENST00000363490 107 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 RNA5SP433-201ENST00000364491 114 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 AL121977.1-201ENST00000401636 979 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 RPL12P16-201ENST00000431098 498 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 DEFA9P-201ENST00000433042 285 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 AC245517.2-201ENST00000442890 346 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 DNAJC19P5-201ENST00000443295 316 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 MOB1AP2-201ENST00000446060 614 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 CLIC4P1-201ENST00000453177 535 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 Z83838.1-202ENST00000456225 839 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 CST12P-201ENST00000457644 362 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 RPL37P23-201ENST00000492641 294 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 NOP56P3-201ENST00000549457 385 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 AC245884.10-201ENST00000597355 337 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 AL158050.2-201ENST00000605336 568 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 AC005156.1-201ENST00000613371 573 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 MIR1264-201ENST00000616374 69 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 AC007683.2-201ENST00000624681 714 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 AC020633.1-201ENST00000468439 2247 ntBASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.6□□□□□ -1.35
CDK5RAP3Q96JB5 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AP004607.3-201ENST00000530354 3915 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AL096711.1-201ENST00000404780 554 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 RANP4-201ENST00000413361 655 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AC007563.3-201ENST00000433233 371 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AC110602.1-201ENST00000437414 318 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 RPS12P17-201ENST00000438591 377 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 BX679664.2-201ENST00000439282 283 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 ARAFP2-201ENST00000440565 559 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 CYCSP51-201ENST00000443545 318 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AL122020.1-201ENST00000472287 459 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 NPM1P17-201ENST00000479221 602 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 RN7SL57P-201ENST00000493687 290 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AC027026.1-201ENST00000532323 742 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 NPM1P42-201ENST00000560329 862 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms