Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 RNA5SP251-201ENST00000410614 137 ntBASIC5.78□□□□□ -1.48
SIPA1Q96FS4 AP000534.2-201ENST00000412729 568 ntBASIC5.78□□□□□ -1.48
SIPA1Q96FS4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.78□□□□□ -1.48
SIPA1Q96FS4 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 OR2AO1P-201ENST00000476497 403 ntBASIC5.78□□□□□ -1.48
SIPA1Q96FS4 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.78□□□□□ -1.48
SIPA1Q96FS4 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 AC096996.1-201ENST00000563813 325 ntBASIC5.78□□□□□ -1.48
SIPA1Q96FS4 AC007346.2-201ENST00000564816 892 ntBASIC5.78□□□□□ -1.48
SIPA1Q96FS4 AC015720.2-201ENST00000567709 334 ntBASIC5.78□□□□□ -1.48
SIPA1Q96FS4 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 AL451049.1-201ENST00000608672 497 ntBASIC5.78□□□□□ -1.48
SIPA1Q96FS4 AC016911.1-201ENST00000613297 452 ntBASIC5.78□□□□□ -1.48
SIPA1Q96FS4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 MTCO1P7-201ENST00000419523 1542 ntBASIC5.78□□□□□ -1.48
SIPA1Q96FS4 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIPA1Q96FS4 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.77□□□□□ -1.48
SIPA1Q96FS4 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AC117409.1-201ENST00000470499 1310 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 MIR105-2-201ENST00000385083 81 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AC015977.1-201ENST00000418887 292 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AL133173.1-201ENST00000423458 397 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 MAPRE1P3-201ENST00000435438 796 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AC015983.1-201ENST00000441577 373 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 RSL24D1P2-201ENST00000445584 366 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 RBMY2TP-201ENST00000451162 947 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AL606490.1-201ENST00000452266 765 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AC100832.1-201ENST00000471945 383 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AC016839.1-201ENST00000578162 867 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 MIR1269B-201ENST00000580405 75 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AC245128.3-201ENST00000594721 748 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AC119501.1-201ENST00000603646 475 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AC022387.2-201ENST00000604050 448 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AC012213.4-201ENST00000606457 354 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AC211433.2-201ENST00000608433 387 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AC090607.5-201ENST00000615692 224 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 MIR6719-201ENST00000622428 87 ntBASIC5.77□□□□□ -1.49
SIPA1Q96FS4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIPA1Q96FS4 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SIPA1Q96FS4 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SIPA1Q96FS4 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SIPA1Q96FS4 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
SIPA1Q96FS4 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
SIPA1Q96FS4 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.76□□□□□ -1.49
SIPA1Q96FS4 RNU6-618P-201ENST00000363518 112 ntBASIC5.76□□□□□ -1.49
SIPA1Q96FS4 U3.7-201ENST00000363668 216 ntBASIC5.76□□□□□ -1.49
SIPA1Q96FS4 GAPDHP15-201ENST00000398586 975 ntBASIC5.76□□□□□ -1.49
SIPA1Q96FS4 GAPDHP42-201ENST00000406848 981 ntBASIC5.76□□□□□ -1.49
SIPA1Q96FS4 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms