Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC38Q5VT99 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC38Q5VT99 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC38Q5VT99 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC38Q5VT99 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC38Q5VT99 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.69□□□□□ -1.5
LRRC38Q5VT99 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC38Q5VT99 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 AC093671.1-201ENST00000624981 2929 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 RNA5SP46-201ENST00000362370 120 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 RNU4-2-201ENST00000365668 141 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 RN7SKP240-201ENST00000410583 375 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 AL356968.2-201ENST00000412769 1257 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 AL596448.1-201ENST00000415024 392 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 MRPS21P2-201ENST00000424704 264 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 RPS10P18-201ENST00000442662 495 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 REG1CP-206ENST00000447469 496 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 GAPDHP14-201ENST00000450472 937 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 AC109464.1-201ENST00000511091 819 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 HMGN1P9-201ENST00000515212 298 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 CDC42P3-201ENST00000518493 633 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 AC011270.1-201ENST00000558606 583 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 RBM22P12-201ENST00000567098 1255 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 AC092944.2-201ENST00000605443 889 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 AL078621.3-201ENST00000623707 2042 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 CR382285.2-201ENST00000624662 1495 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 AC003973.3-201ENST00000624863 2822 ntBASIC5.68□□□□□ -1.5
LRRC38Q5VT99 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
LRRC38Q5VT99 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AC002525.1-201ENST00000624392 1622 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 LYPLA1P3-201ENST00000402650 695 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AL672138.1-201ENST00000450604 1015 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 RPS12P31-201ENST00000491419 398 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 PFN1P8-201ENST00000497012 543 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AC016559.2-201ENST00000510759 359 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 MTND6P2-201ENST00000512226 524 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AC022360.1-201ENST00000521058 340 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 OR8G3P-201ENST00000533406 921 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 NMNAT1P5-201ENST00000559657 841 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AP005403.1-201ENST00000579720 229 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 RN7SL356P-201ENST00000582228 248 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AP000769.2-201ENST00000602344 396 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AL118522.2-201ENST00000616045 615 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AC107905.1-201ENST00000616204 426 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 MIR6071-201ENST00000616741 78 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AC109583.2-201ENST00000617367 129 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AC002044.3-201ENST00000623314 541 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 CU639417.4-201ENST00000623928 207 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AC015689.2-201ENST00000528172 1738 ntBASIC5.67□□□□□ -1.5
LRRC38Q5VT99 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRRC38Q5VT99 AC079298.1-201ENST00000625026 1619 ntBASIC5.66□□□□□ -1.5
LRRC38Q5VT99 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.66□□□□□ -1.5
LRRC38Q5VT99 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRRC38Q5VT99 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms