Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 AC097486.1-201ENST00000515331 210 ntBASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 RN7SL356P-201ENST00000582228 248 ntBASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 SUGT1P3-202ENST00000604259 383 ntBASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 FAM72A-208ENST00000607379 1139 ntBASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 AL356608.1-201ENST00000610034 820 ntBASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 RNA5SP439-201ENST00000617595 124 ntBASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN20Q4JDL3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 CASC19-248ENST00000641674 1356 ntBASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 AL360270.2-201ENST00000562952 5985 ntBASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 SNORA11.3-201ENST00000408471 128 ntBASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 GPS2P1-201ENST00000411761 986 ntBASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 AL513325.1-201ENST00000417716 1034 ntBASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 AL391987.1-201ENST00000441025 200 ntBASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 RN7SL184P-201ENST00000488308 297 ntBASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 AC007204.2-201ENST00000615022 616 ntBASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 SNORA11.6-201ENST00000619030 128 ntBASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 AC099654.6-201ENST00000636487 512 ntBASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 AC109446.4-201ENST00000623235 2755 ntBASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 ADAM24P-201ENST00000398655 2101 ntBASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN20Q4JDL3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 AL078621.3-201ENST00000623707 2042 ntBASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 RNA5SP132-201ENST00000364725 118 ntBASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 CHEK2P5-201ENST00000423877 246 ntBASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 NAP1L4P2-201ENST00000425958 899 ntBASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 RN7SL174P-201ENST00000475578 289 ntBASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 AC058823.1-201ENST00000485315 474 ntBASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 RN7SL101P-201ENST00000496350 279 ntBASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 RPEP1-201ENST00000504507 658 ntBASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 IGLVIV-64-201ENST00000518581 301 ntBASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 AL583832.1-201ENST00000603227 784 ntBASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 AL034374.2-201ENST00000605281 548 ntBASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 AL359513.1-201ENST00000614364 557 ntBASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 AC241377.1-201ENST00000619797 406 ntBASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 AP003400.3-201ENST00000624904 346 ntBASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN20Q4JDL3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 NLRP3P1-201ENST00000622303 1785 ntBASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms