Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH12P55289 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
CDH12P55289 AC004808.1-201ENST00000627671 721 ntBASIC5.39□□□□□ -1.55
CDH12P55289 AC099654.8-201ENST00000637757 681 ntBASIC5.39□□□□□ -1.55
CDH12P55289 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
CDH12P55289 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH12P55289 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
CDH12P55289 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH12P55289 AL022311.1-201ENST00000623726 19416 ntBASIC5.39□□□□□ -1.55
CDH12P55289 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH12P55289 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH12P55289 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CDH12P55289 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH12P55289 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH12P55289 AC083837.1-201ENST00000565297 2994 ntBASIC5.39□□□□□ -1.55
CDH12P55289 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH12P55289 RBPJP7-201ENST00000442803 1447 ntBASIC5.39□□□□□ -1.55
CDH12P55289 RBPJP5-201ENST00000449433 1447 ntBASIC5.39□□□□□ -1.55
CDH12P55289 MTCO1P4-201ENST00000520516 1409 ntBASIC5.39□□□□□ -1.55
CDH12P55289 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH12P55289 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
CDH12P55289 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH12P55289 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH12P55289 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CDH12P55289 PSG10P-201ENST00000501199 1500 ntBASIC5.38□□□□□ -1.55
CDH12P55289 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CDH12P55289 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CDH12P55289 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH12P55289 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH12P55289 AC012254.3-201ENST00000591183 2117 ntBASIC5.38□□□□□ -1.55
CDH12P55289 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH12P55289 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH12P55289 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH12P55289 AC008627.1-201ENST00000517511 1704 ntBASIC5.38□□□□□ -1.55
CDH12P55289 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH12P55289 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH12P55289 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH12P55289 AC007068.1-201ENST00000396690 844 ntBASIC5.38□□□□□ -1.55
CDH12P55289 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH12P55289 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH12P55289 RPL35AP3-201ENST00000414680 288 ntBASIC5.38□□□□□ -1.55
CDH12P55289 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH12P55289 RPS4XP5-201ENST00000419038 768 ntBASIC5.38□□□□□ -1.55
CDH12P55289 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH12P55289 MTCO2P17-201ENST00000424336 677 ntBASIC5.38□□□□□ -1.55
CDH12P55289 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH12P55289 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH12P55289 AL645931.1-201ENST00000439737 410 ntBASIC5.38□□□□□ -1.55
CDH12P55289 CCRL1P1-201ENST00000449542 1053 ntBASIC5.38□□□□□ -1.55
CDH12P55289 AC073476.1-201ENST00000452854 407 ntBASIC5.38□□□□□ -1.55
CDH12P55289 RN7SL269P-201ENST00000467795 305 ntBASIC5.38□□□□□ -1.55
CDH12P55289 AC023245.1-201ENST00000468501 517 ntBASIC5.38□□□□□ -1.55
CDH12P55289 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH12P55289 RN7SL568P-201ENST00000493069 298 ntBASIC5.38□□□□□ -1.55
CDH12P55289 GTF2IP9-201ENST00000502460 301 ntBASIC5.38□□□□□ -1.55
CDH12P55289 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH12P55289 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
CDH12P55289 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH12P55289 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH12P55289 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH12P55289 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH12P55289 AP003033.2-201ENST00000528901 805 ntBASIC5.38□□□□□ -1.55
CDH12P55289 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH12P55289 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH12P55289 AC121758.1-202ENST00000556917 658 ntBASIC5.38□□□□□ -1.55
CDH12P55289 HMGN2P47-201ENST00000559378 272 ntBASIC5.38□□□□□ -1.55
CDH12P55289 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH12P55289 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH12P55289 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH12P55289 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH12P55289 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CDH12P55289 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH12P55289 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.38□□□□□ -1.55
CDH12P55289 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH12P55289 MIR6721-201ENST00000617181 87 ntBASIC5.38□□□□□ -1.55
CDH12P55289 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH12P55289 TMEM30CP-203ENST00000637814 1035 ntBASIC5.38□□□□□ -1.55
CDH12P55289 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CDH12P55289 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CDH12P55289 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH12P55289 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH12P55289 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH12P55289 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH12P55289 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH12P55289 MFSD8-219ENST00000641228 2559 ntBASIC5.38□□□□□ -1.55
CDH12P55289 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH12P55289 ADAM24P-201ENST00000398655 2101 ntBASIC5.38□□□□□ -1.55
CDH12P55289 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH12P55289 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH12P55289 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH12P55289 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH12P55289 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH12P55289 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH12P55289 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH12P55289 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH12P55289 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CDH12P55289 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CDH12P55289 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH12P55289 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
CDH12P55289 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms