Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.65□□□□□ -1.51
CLCNKAP51800 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CLCNKAP51800 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CLCNKAP51800 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
CLCNKAP51800 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLCNKAP51800 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.64□□□□□ -1.51
CLCNKAP51800 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.64□□□□□ -1.51
CLCNKAP51800 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCNKAP51800 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLCNKAP51800 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.64□□□□□ -1.51
CLCNKAP51800 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCNKAP51800 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCNKAP51800 AL159987.1-201ENST00000347911 293 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 RNU6-670P-201ENST00000364312 104 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCNKAP51800 RNU6-883P-201ENST00000384597 107 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 AC087752.1-201ENST00000391360 558 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.64□□□□□ -1.51
CLCNKAP51800 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.64□□□□□ -1.51
CLCNKAP51800 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.64□□□□□ -1.51
CLCNKAP51800 Z84478.1-201ENST00000438230 1219 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 SDR42E1P3-201ENST00000438345 502 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 AL391987.1-201ENST00000441025 200 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 RPS15AP29-201ENST00000445539 400 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.64□□□□□ -1.51
CLCNKAP51800 RPL31P53-201ENST00000457065 348 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 AC023141.9-201ENST00000458734 412 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.64□□□□□ -1.51
CLCNKAP51800 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.64□□□□□ -1.51
CLCNKAP51800 RPSAP37-201ENST00000470913 821 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 AC073610.1-201ENST00000489971 396 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.64□□□□□ -1.51
CLCNKAP51800 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.64□□□□□ -1.51
CLCNKAP51800 AC105384.2-201ENST00000508433 640 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 AC026782.2-201ENST00000510845 636 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.64□□□□□ -1.51
CLCNKAP51800 RFPL4AP3-201ENST00000515267 345 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 AC078899.1-201ENST00000521432 1185 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.64□□□□□ -1.51
CLCNKAP51800 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.64□□□□□ -1.51
CLCNKAP51800 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.64□□□□□ -1.51
CLCNKAP51800 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.64□□□□□ -1.51
CLCNKAP51800 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.64□□□□□ -1.51
CLCNKAP51800 AC012414.2-201ENST00000559474 187 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CLCNKAP51800 FAM72A-208ENST00000607379 1139 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
CLCNKAP51800 AL355480.1-201ENST00000629041 99 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLCNKAP51800 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLCNKAP51800 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCNKAP51800 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCNKAP51800 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCNKAP51800 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.64□□□□□ -1.51
CLCNKAP51800 Z83820.1-201ENST00000456978 1499 ntBASIC5.64□□□□□ -1.51
CLCNKAP51800 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.64□□□□□ -1.51
CLCNKAP51800 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCNKAP51800 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCNKAP51800 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
CLCNKAP51800 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCNKAP51800 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCNKAP51800 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCNKAP51800 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.63□□□□□ -1.51
CLCNKAP51800 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCNKAP51800 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
CLCNKAP51800 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
CLCNKAP51800 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCNKAP51800 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
CLCNKAP51800 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCNKAP51800 NIFKP3-201ENST00000417799 865 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 VN1R21P-201ENST00000426703 765 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 AC073410.1-201ENST00000435125 589 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 GAPDHP48-201ENST00000436626 961 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCNKAP51800 AP000281.1-201ENST00000444036 316 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 AC005297.1-201ENST00000444765 862 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 OR7E116P-201ENST00000448529 957 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCNKAP51800 RN7SL717P-201ENST00000478343 297 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCNKAP51800 MTND3P3-201ENST00000505004 126 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 AC138866.2-201ENST00000508650 584 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 AC109481.1-201ENST00000509173 282 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCNKAP51800 AC106872.4-201ENST00000510050 523 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 SNORA43.3-201ENST00000517240 103 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCNKAP51800 MRPS16P1-201ENST00000523462 412 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.63□□□□□ -1.51
CLCNKAP51800 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.63□□□□□ -1.51
CLCNKAP51800 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCNKAP51800 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCNKAP51800 MTND2P13-201ENST00000577438 1039 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.63□□□□□ -1.51
CLCNKAP51800 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.63□□□□□ -1.51
CLCNKAP51800 RN7SL787P-201ENST00000613000 284 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 CU639417.4-201ENST00000623928 207 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 AC007683.2-201ENST00000624681 714 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms