Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 BLZF2P-201ENST00000553776 1130 ntBASIC4.85□□□□□ -1.63
HCFC1P51610 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.85□□□□□ -1.63
HCFC1P51610 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC4.85□□□□□ -1.63
HCFC1P51610 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.85□□□□□ -1.63
HCFC1P51610 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.85□□□□□ -1.63
HCFC1P51610 AP005212.4-201ENST00000614206 710 ntBASIC4.85□□□□□ -1.63
HCFC1P51610 AL109620.1-201ENST00000618738 1197 ntBASIC4.85□□□□□ -1.63
HCFC1P51610 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
HCFC1P51610 AP000550.3-201ENST00000637734 379 ntBASIC4.85□□□□□ -1.63
HCFC1P51610 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.85□□□□□ -1.63
HCFC1P51610 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HCFC1P51610 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HCFC1P51610 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC4.85□□□□□ -1.63
HCFC1P51610 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.85□□□□□ -1.63
HCFC1P51610 AC023421.1-201ENST00000590535 1785 ntBASIC4.85□□□□□ -1.63
HCFC1P51610 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.85□□□□□ -1.63
HCFC1P51610 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.85□□□□□ -1.63
HCFC1P51610 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC4.85□□□□□ -1.63
HCFC1P51610 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HCFC1P51610 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HCFC1P51610 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HCFC1P51610 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HCFC1P51610 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HCFC1P51610 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HCFC1P51610 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HCFC1P51610 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.85□□□□□ -1.63
HCFC1P51610 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HCFC1P51610 MIR551A-201ENST00000385042 96 ntBASIC4.85□□□□□ -1.63
HCFC1P51610 AL365220.1-201ENST00000432923 399 ntBASIC4.85□□□□□ -1.63
HCFC1P51610 KRT8P51-201ENST00000438938 274 ntBASIC4.85□□□□□ -1.63
HCFC1P51610 AL136455.1-201ENST00000441083 1240 ntBASIC4.85□□□□□ -1.63
HCFC1P51610 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.85□□□□□ -1.63
HCFC1P51610 RPS23P9-201ENST00000448848 438 ntBASIC4.85□□□□□ -1.63
HCFC1P51610 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.85□□□□□ -1.63
HCFC1P51610 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC4.85□□□□□ -1.63
HCFC1P51610 IGLV2-34-201ENST00000490007 283 ntBASIC4.85□□□□□ -1.63
HCFC1P51610 IGLV3-24-201ENST00000517477 197 ntBASIC4.85□□□□□ -1.63
HCFC1P51610 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.85□□□□□ -1.63
HCFC1P51610 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.85□□□□□ -1.63
HCFC1P51610 AL163952.1-202ENST00000569625 600 ntBASIC4.85□□□□□ -1.63
HCFC1P51610 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.85□□□□□ -1.63
HCFC1P51610 AC010615.3-201ENST00000597319 394 ntBASIC4.85□□□□□ -1.63
HCFC1P51610 AC091953.3-201ENST00000623220 236 ntBASIC4.85□□□□□ -1.63
HCFC1P51610 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HCFC1P51610 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HCFC1P51610 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HCFC1P51610 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HCFC1P51610 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.85□□□□□ -1.63
HCFC1P51610 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.85□□□□□ -1.63
HCFC1P51610 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.85□□□□□ -1.63
HCFC1P51610 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC4.85□□□□□ -1.63
HCFC1P51610 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HCFC1P51610 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HCFC1P51610 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HCFC1P51610 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HCFC1P51610 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HCFC1P51610 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HCFC1P51610 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HCFC1P51610 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HCFC1P51610 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.84□□□□□ -1.63
HCFC1P51610 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HCFC1P51610 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HCFC1P51610 OR4K12P-201ENST00000406538 961 ntBASIC4.84□□□□□ -1.63
HCFC1P51610 RPS11P7-201ENST00000442125 465 ntBASIC4.84□□□□□ -1.63
HCFC1P51610 RPL7P45-201ENST00000455851 743 ntBASIC4.84□□□□□ -1.63
HCFC1P51610 RN7SL591P-201ENST00000496150 292 ntBASIC4.84□□□□□ -1.63
HCFC1P51610 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.84□□□□□ -1.63
HCFC1P51610 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.84□□□□□ -1.63
HCFC1P51610 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
HCFC1P51610 TRAV11-201ENST00000539512 339 ntBASIC4.84□□□□□ -1.63
HCFC1P51610 DPPA3P2-202ENST00000557188 1219 ntBASIC4.84□□□□□ -1.63
HCFC1P51610 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.84□□□□□ -1.63
HCFC1P51610 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.84□□□□□ -1.63
HCFC1P51610 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.84□□□□□ -1.63
HCFC1P51610 AC100814.1-201ENST00000606963 623 ntBASIC4.84□□□□□ -1.63
HCFC1P51610 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.84□□□□□ -1.63
HCFC1P51610 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.84□□□□□ -1.63
HCFC1P51610 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.84□□□□□ -1.63
HCFC1P51610 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.84□□□□□ -1.63
HCFC1P51610 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.84□□□□□ -1.63
HCFC1P51610 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
HCFC1P51610 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HCFC1P51610 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.84□□□□□ -1.63
HCFC1P51610 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
HCFC1P51610 DMD-202ENST00000343523 5623 ntTSL 5 BASIC4.84□□□□□ -1.63
HCFC1P51610 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HCFC1P51610 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
HCFC1P51610 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HCFC1P51610 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
HCFC1P51610 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HCFC1P51610 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
HCFC1P51610 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.84□□□□□ -1.64
HCFC1P51610 RNU1-43P-201ENST00000365052 165 ntBASIC4.84□□□□□ -1.64
HCFC1P51610 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HCFC1P51610 RNA5SP87-201ENST00000384155 118 ntBASIC4.84□□□□□ -1.64
HCFC1P51610 U3.28-201ENST00000391249 210 ntBASIC4.84□□□□□ -1.64
HCFC1P51610 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
HCFC1P51610 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.84□□□□□ -1.64
HCFC1P51610 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.84□□□□□ -1.64
HCFC1P51610 MEMO1P4-201ENST00000453590 386 ntBASIC4.84□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms