Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 SNORA70.2-201ENST00000364506 135 ntBASIC9.36□□□□□ -0.91
SMARCA4P51532 DNAJC19P7-201ENST00000428811 344 ntBASIC9.36□□□□□ -0.91
SMARCA4P51532 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SMARCA4P51532 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC9.36□□□□□ -0.91
SMARCA4P51532 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC9.36□□□□□ -0.91
SMARCA4P51532 RPS23P7-201ENST00000466210 444 ntBASIC9.36□□□□□ -0.91
SMARCA4P51532 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC9.36□□□□□ -0.91
SMARCA4P51532 IGBP1P5-201ENST00000507524 1000 ntBASIC9.36□□□□□ -0.91
SMARCA4P51532 GAPDHP62-201ENST00000515313 990 ntBASIC9.36□□□□□ -0.91
SMARCA4P51532 AC105254.2-201ENST00000603636 436 ntBASIC9.36□□□□□ -0.91
SMARCA4P51532 AC005377.1-201ENST00000605126 456 ntBASIC9.36□□□□□ -0.91
SMARCA4P51532 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
SMARCA4P51532 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC9.36□□□□□ -0.91
SMARCA4P51532 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
SMARCA4P51532 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMARCA4P51532 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC9.36□□□□□ -0.91
SMARCA4P51532 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMARCA4P51532 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMARCA4P51532 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
SMARCA4P51532 CAST-202ENST00000325674 3356 ntTSL 5 BASIC9.35□□□□□ -0.91
SMARCA4P51532 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMARCA4P51532 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC9.35□□□□□ -0.91
SMARCA4P51532 GLUD1P3-202ENST00000508551 200 ntBASIC9.35□□□□□ -0.91
SMARCA4P51532 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMARCA4P51532 AC012414.7-202ENST00000622705 1090 ntBASIC9.35□□□□□ -0.91
SMARCA4P51532 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMARCA4P51532 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMARCA4P51532 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMARCA4P51532 AC144833.1-201ENST00000567953 4089 ntBASIC9.35□□□□□ -0.91
SMARCA4P51532 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMARCA4P51532 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMARCA4P51532 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMARCA4P51532 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMARCA4P51532 EEF1A1P36-201ENST00000427807 1351 ntBASIC9.35□□□□□ -0.91
SMARCA4P51532 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMARCA4P51532 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMARCA4P51532 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC9.35□□□□□ -0.91
SMARCA4P51532 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
SMARCA4P51532 RN7SKP114-201ENST00000410327 279 ntBASIC9.34□□□□□ -0.91
SMARCA4P51532 CNOT7P1-201ENST00000429006 852 ntBASIC9.34□□□□□ -0.91
SMARCA4P51532 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
SMARCA4P51532 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC9.34□□□□□ -0.91
SMARCA4P51532 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC9.34□□□□□ -0.91
SMARCA4P51532 AC011453.2-201ENST00000603737 729 ntBASIC9.34□□□□□ -0.91
SMARCA4P51532 AC009027.1-201ENST00000604510 479 ntBASIC9.34□□□□□ -0.91
SMARCA4P51532 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMARCA4P51532 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC9.34□□□□□ -0.91
SMARCA4P51532 AP003175.1-201ENST00000641383 6658 ntBASIC9.34□□□□□ -0.91
SMARCA4P51532 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SMARCA4P51532 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMARCA4P51532 RNU1-74P-201ENST00000384108 171 ntBASIC9.34□□□□□ -0.91
SMARCA4P51532 HSPA8P15-201ENST00000401676 786 ntBASIC9.34□□□□□ -0.91
SMARCA4P51532 PPIAP9-201ENST00000403866 498 ntBASIC9.34□□□□□ -0.91
SMARCA4P51532 AC004690.1-201ENST00000418216 328 ntBASIC9.34□□□□□ -0.91
SMARCA4P51532 AC092651.1-201ENST00000426110 312 ntBASIC9.34□□□□□ -0.91
SMARCA4P51532 ATP6V0E1P2-201ENST00000441771 245 ntBASIC9.34□□□□□ -0.91
SMARCA4P51532 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC9.34□□□□□ -0.91
SMARCA4P51532 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC9.34□□□□□ -0.91
SMARCA4P51532 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
SMARCA4P51532 AC006967.1-201ENST00000467608 589 ntBASIC9.34□□□□□ -0.91
SMARCA4P51532 FTH1P8-201ENST00000498161 514 ntBASIC9.34□□□□□ -0.91
SMARCA4P51532 AC012400.1-201ENST00000518452 381 ntBASIC9.34□□□□□ -0.91
SMARCA4P51532 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC9.34□□□□□ -0.91
SMARCA4P51532 OR4A17P-201ENST00000526032 904 ntBASIC9.34□□□□□ -0.91
SMARCA4P51532 RGS5-219ENST00000528019 512 ntTSL 4 BASIC9.34□□□□□ -0.91
SMARCA4P51532 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC9.34□□□□□ -0.91
SMARCA4P51532 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC9.34□□□□□ -0.91
SMARCA4P51532 NPM1P42-201ENST00000560329 862 ntBASIC9.34□□□□□ -0.91
SMARCA4P51532 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC9.34□□□□□ -0.91
SMARCA4P51532 AC060780.2-201ENST00000589047 198 ntBASIC9.34□□□□□ -0.91
SMARCA4P51532 AC019193.2-201ENST00000610012 634 ntBASIC9.34□□□□□ -0.91
SMARCA4P51532 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC9.34□□□□□ -0.91
SMARCA4P51532 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC9.34□□□□□ -0.91
SMARCA4P51532 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC9.34□□□□□ -0.91
SMARCA4P51532 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SMARCA4P51532 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMARCA4P51532 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC9.33□□□□□ -0.92
SMARCA4P51532 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC9.33□□□□□ -0.92
SMARCA4P51532 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
SMARCA4P51532 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
SMARCA4P51532 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SMARCA4P51532 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC9.33□□□□□ -0.92
SMARCA4P51532 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC9.33□□□□□ -0.92
SMARCA4P51532 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SMARCA4P51532 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMARCA4P51532 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMARCA4P51532 RPL32P3-201ENST00000359025 275 ntBASIC9.33□□□□□ -0.92
SMARCA4P51532 SNORA66-201ENST00000384792 133 ntBASIC9.33□□□□□ -0.92
SMARCA4P51532 AL049693.1-201ENST00000402760 611 ntBASIC9.33□□□□□ -0.92
SMARCA4P51532 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SMARCA4P51532 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC9.33□□□□□ -0.92
SMARCA4P51532 AC097173.1-201ENST00000505862 819 ntBASIC9.33□□□□□ -0.92
SMARCA4P51532 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC9.33□□□□□ -0.92
SMARCA4P51532 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC9.33□□□□□ -0.92
SMARCA4P51532 AC098935.2-201ENST00000604222 466 ntBASIC9.33□□□□□ -0.92
SMARCA4P51532 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMARCA4P51532 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
SMARCA4P51532 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SMARCA4P51532 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SMARCA4P51532 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 987 ms