Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.93□□□□□ -1.46
PTPN9P43378 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN9P43378 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
PTPN9P43378 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN9P43378 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN9P43378 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN9P43378 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
PTPN9P43378 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.92□□□□□ -1.46
PTPN9P43378 LINC02019-201ENST00000608605 2060 ntBASIC5.92□□□□□ -1.46
PTPN9P43378 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN9P43378 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN9P43378 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
PTPN9P43378 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN9P43378 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PTPN9P43378 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN9P43378 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN9P43378 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
PTPN9P43378 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.92□□□□□ -1.46
PTPN9P43378 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN9P43378 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN9P43378 REREP1Y-201ENST00000422655 198 ntBASIC5.92□□□□□ -1.46
PTPN9P43378 AKR1B10P1-201ENST00000425765 942 ntBASIC5.92□□□□□ -1.46
PTPN9P43378 MTND4LP7-201ENST00000431728 294 ntBASIC5.92□□□□□ -1.46
PTPN9P43378 REREP2Y-201ENST00000439103 200 ntBASIC5.92□□□□□ -1.46
PTPN9P43378 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN9P43378 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN9P43378 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.92□□□□□ -1.46
PTPN9P43378 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN9P43378 AC084754.1-201ENST00000463466 464 ntBASIC5.92□□□□□ -1.46
PTPN9P43378 RPS17P5-201ENST00000498293 408 ntBASIC5.92□□□□□ -1.46
PTPN9P43378 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN9P43378 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.92□□□□□ -1.46
PTPN9P43378 MRPS16P1-201ENST00000523462 412 ntBASIC5.92□□□□□ -1.46
PTPN9P43378 AC084824.2-201ENST00000548906 345 ntBASIC5.92□□□□□ -1.46
PTPN9P43378 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.92□□□□□ -1.46
PTPN9P43378 AP001496.3-201ENST00000580230 913 ntBASIC5.92□□□□□ -1.46
PTPN9P43378 MIR4311-201ENST00000580794 100 ntBASIC5.92□□□□□ -1.46
PTPN9P43378 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.92□□□□□ -1.46
PTPN9P43378 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.92□□□□□ -1.46
PTPN9P43378 AC027243.2-201ENST00000602530 724 ntBASIC5.92□□□□□ -1.46
PTPN9P43378 AC084824.5-201ENST00000612009 413 ntBASIC5.92□□□□□ -1.46
PTPN9P43378 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.92□□□□□ -1.46
PTPN9P43378 LINC00216-201ENST00000623548 1126 ntBASIC5.92□□□□□ -1.46
PTPN9P43378 AC093909.5-201ENST00000621839 1799 ntBASIC5.92□□□□□ -1.46
PTPN9P43378 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN9P43378 AC239868.2-201ENST00000564237 4527 ntBASIC5.92□□□□□ -1.46
PTPN9P43378 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN9P43378 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN9P43378 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN9P43378 LINC01963-201ENST00000562038 3148 ntBASIC5.92□□□□□ -1.46
PTPN9P43378 HSPD1P7-201ENST00000447985 1686 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 OR10AB1P-202ENST00000641219 1686 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
PTPN9P43378 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.91□□□□□ -1.46
PTPN9P43378 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN9P43378 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN9P43378 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN9P43378 AC138907.8-201ENST00000623981 2256 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN9P43378 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.91□□□□□ -1.46
PTPN9P43378 AP005435.3-201ENST00000531260 3198 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.91□□□□□ -1.46
PTPN9P43378 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN9P43378 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN9P43378 AL121886.1-201ENST00000358609 435 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.91□□□□□ -1.46
PTPN9P43378 RNA5SP394-201ENST00000364216 119 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.91□□□□□ -1.46
PTPN9P43378 AC005042.1-201ENST00000393397 800 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 AC007068.1-201ENST00000396690 844 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 HMGB1P20-201ENST00000402555 677 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 AC096921.1-201ENST00000411661 375 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 RAB9AP4-201ENST00000415230 609 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.91□□□□□ -1.46
PTPN9P43378 AC093155.2-201ENST00000420734 937 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 AC073464.3-201ENST00000422564 712 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 TMEM183AP1-205ENST00000432739 290 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.91□□□□□ -1.46
PTPN9P43378 AL138899.2-201ENST00000439139 499 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 CYCSP51-201ENST00000443545 318 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.91□□□□□ -1.46
PTPN9P43378 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN9P43378 RPS23P9-201ENST00000448848 438 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.91□□□□□ -1.46
PTPN9P43378 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.91□□□□□ -1.46
PTPN9P43378 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.91□□□□□ -1.46
PTPN9P43378 AC022336.1-201ENST00000475510 337 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 ATP5LP5-201ENST00000483050 299 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.91□□□□□ -1.46
PTPN9P43378 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.91□□□□□ -1.46
PTPN9P43378 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PTPN9P43378 DUTP7-201ENST00000507982 486 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 GLUD1P3-202ENST00000508551 200 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 AC025768.1-201ENST00000510057 267 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN9P43378 IGLV3-24-201ENST00000517477 197 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.91□□□□□ -1.46
PTPN9P43378 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.91□□□□□ -1.46
PTPN9P43378 AC136777.2-201ENST00000522979 358 ntBASIC5.91□□□□□ -1.46
PTPN9P43378 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms