Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.68□□□□□ -1.5
SLC1A1P43005 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC1A1P43005 RNA5SP46-201ENST00000362370 120 ntBASIC5.68□□□□□ -1.5
SLC1A1P43005 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.68□□□□□ -1.5
SLC1A1P43005 AC124944.2-201ENST00000429866 1242 ntBASIC5.68□□□□□ -1.5
SLC1A1P43005 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC1A1P43005 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC1A1P43005 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC1A1P43005 AC092754.1-201ENST00000472975 479 ntBASIC5.68□□□□□ -1.5
SLC1A1P43005 AC022133.1-201ENST00000490961 571 ntBASIC5.68□□□□□ -1.5
SLC1A1P43005 AL049874.2-201ENST00000492636 288 ntBASIC5.68□□□□□ -1.5
SLC1A1P43005 AC006499.4-201ENST00000510947 694 ntBASIC5.68□□□□□ -1.5
SLC1A1P43005 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.68□□□□□ -1.5
SLC1A1P43005 NANOGNBP2-201ENST00000544753 553 ntBASIC5.68□□□□□ -1.5
SLC1A1P43005 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC1A1P43005 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.68□□□□□ -1.5
SLC1A1P43005 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC1A1P43005 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC1A1P43005 AC009852.2-201ENST00000567898 485 ntBASIC5.68□□□□□ -1.5
SLC1A1P43005 MTCYBP13-201ENST00000578634 1093 ntBASIC5.68□□□□□ -1.5
SLC1A1P43005 MIR4660-201ENST00000583549 74 ntBASIC5.68□□□□□ -1.5
SLC1A1P43005 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC1A1P43005 AC079315.1-201ENST00000602952 623 ntBASIC5.68□□□□□ -1.5
SLC1A1P43005 AL096712.1-201ENST00000614561 159 ntBASIC5.68□□□□□ -1.5
SLC1A1P43005 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC1A1P43005 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC1A1P43005 AC091932.2-201ENST00000623014 291 ntBASIC5.68□□□□□ -1.5
SLC1A1P43005 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC1A1P43005 AC099654.6-201ENST00000636487 512 ntBASIC5.68□□□□□ -1.5
SLC1A1P43005 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC1A1P43005 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SLC1A1P43005 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SLC1A1P43005 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC1A1P43005 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC1A1P43005 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC1A1P43005 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC1A1P43005 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC1A1P43005 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC1A1P43005 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC1A1P43005 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.68□□□□□ -1.5
SLC1A1P43005 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.67□□□□□ -1.5
SLC1A1P43005 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SLC1A1P43005 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SLC1A1P43005 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
SLC1A1P43005 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.67□□□□□ -1.5
SLC1A1P43005 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.67□□□□□ -1.5
SLC1A1P43005 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SLC1A1P43005 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SLC1A1P43005 OR2AT2P-201ENST00000413438 905 ntBASIC5.67□□□□□ -1.5
SLC1A1P43005 SLC20A1P1-201ENST00000413906 956 ntBASIC5.67□□□□□ -1.5
SLC1A1P43005 BMS1P17-202ENST00000416720 316 ntBASIC5.67□□□□□ -1.5
SLC1A1P43005 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SLC1A1P43005 AL121878.1-201ENST00000418638 859 ntBASIC5.67□□□□□ -1.5
SLC1A1P43005 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.67□□□□□ -1.5
SLC1A1P43005 DNAJA1P5-201ENST00000440278 943 ntBASIC5.67□□□□□ -1.5
SLC1A1P43005 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.67□□□□□ -1.5
SLC1A1P43005 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.67□□□□□ -1.5
SLC1A1P43005 EIF3KP3-201ENST00000514461 639 ntBASIC5.67□□□□□ -1.5
SLC1A1P43005 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.67□□□□□ -1.5
SLC1A1P43005 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.67□□□□□ -1.5
SLC1A1P43005 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.67□□□□□ -1.5
SLC1A1P43005 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.67□□□□□ -1.5
SLC1A1P43005 AL049872.1-201ENST00000556323 322 ntBASIC5.67□□□□□ -1.5
SLC1A1P43005 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.67□□□□□ -1.5
SLC1A1P43005 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.67□□□□□ -1.5
SLC1A1P43005 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.67□□□□□ -1.5
SLC1A1P43005 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SLC1A1P43005 AC008115.3-201ENST00000614874 549 ntBASIC5.67□□□□□ -1.5
SLC1A1P43005 AL118522.2-201ENST00000616045 615 ntBASIC5.67□□□□□ -1.5
SLC1A1P43005 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.67□□□□□ -1.5
SLC1A1P43005 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SLC1A1P43005 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.67□□□□□ -1.5
SLC1A1P43005 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SLC1A1P43005 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SLC1A1P43005 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SLC1A1P43005 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SLC1A1P43005 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SLC1A1P43005 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.67□□□□□ -1.5
SLC1A1P43005 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SLC1A1P43005 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SLC1A1P43005 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SLC1A1P43005 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
SLC1A1P43005 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SLC1A1P43005 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
SLC1A1P43005 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SLC1A1P43005 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SLC1A1P43005 MTCO1P7-201ENST00000419523 1542 ntBASIC5.66□□□□□ -1.5
SLC1A1P43005 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.66□□□□□ -1.5
SLC1A1P43005 RN7SKP28-201ENST00000364770 305 ntBASIC5.66□□□□□ -1.5
SLC1A1P43005 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.66□□□□□ -1.5
SLC1A1P43005 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SLC1A1P43005 OR7E156P-201ENST00000400303 464 ntBASIC5.66□□□□□ -1.5
SLC1A1P43005 VN1R12P-201ENST00000403778 876 ntBASIC5.66□□□□□ -1.5
SLC1A1P43005 HMGN1P20-201ENST00000411849 300 ntBASIC5.66□□□□□ -1.5
SLC1A1P43005 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.66□□□□□ -1.5
SLC1A1P43005 SUMO2P8-201ENST00000434672 286 ntBASIC5.66□□□□□ -1.5
SLC1A1P43005 AL035090.1-201ENST00000454835 332 ntBASIC5.66□□□□□ -1.5
SLC1A1P43005 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.66□□□□□ -1.5
SLC1A1P43005 HMGB1P44-201ENST00000508597 572 ntBASIC5.66□□□□□ -1.5
SLC1A1P43005 AC109481.1-201ENST00000509173 282 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms